Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03516 ATGGTTCAACAGGAATTCCGGAAAGGTCCATGGACAGAACAGGAGGACATCAAACTGGTCTCCTTTGTTGGCTTATTCGGAGACCGGAGATGGGATTTTATAGCCAAAGTTTCAGGTTTGAATAGAACAGGTAAGAGTTGCAGGTTACGGTGGGTTAATTACCTGCATCCTGGTCTCAAACGGGGCAAGATGACGCCCCAAGAAGAGCGCCTCGTGCTGGAGCTTCACGCCAAATGGGGAAATAGATGGTCAAGAATTGCTCGGAAATTGCCAGGGCGCACAGATAATGAGATTAAGAATTACTGGAGGACTTACATGAGGAAGAAGGCCCAGGAAACAAAGCGGGTGGCCACTCCATCATCAACATCAAGTTGTCATTCTTCACTATCATCAAATAATCAAGCGGTGGGTTCACATCCTTCCAAGGAGAGTGGAGAAGAAAGCTTTTATGACACAGGAGGGCCAAATATGATTGACCCCACAGAAATCAAGATAGGGAAAGAACAAGGTGAACAGGGTTACTCCATGGATGACATATGGAAGGATATTGCTCTGTCAGAAGAGAATGTTCAGAACCCAGTCCATGCTAGTGTTAGGCATATTGAAGAGGAGTGCAGCTTCTTTGGTCCTCATCTGCCATCTCCTTCTTGGGAGTATTCTTCAGACTCGCTGTGGGTTATGGATGAAGAAGGTAAGACATTTCTCCCTTCAAGTGATCAATTCTTTTCCAGTTTTGAACATGGGGCAGCACCTGCATTTCTAACTGGCTAA 771 0.4578 MVQQEFRKGPWTEQEDIKLVSFVGLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGLKRGKMTPQEERLVLELHAKWGNRWSRIARKLPGRTDNEIKNYWRTYMRKKAQETKRVATPSSTSSCHSSLSSNNQAVGSHPSKESGEESFYDTGGPNMIDPTEIKIGKEQGEQGYSMDDIWKDIALSEENVQNPVHASVRHIEEECSFFGPHLPSPSWEYSSDSLWVMDEEGKTFLPSSDQFFSSFEHGAAPAFLTG 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03516 256 Pfam Myb-like DNA-binding domain 61 105 IPR001005 -
Accr1g03516 256 Pfam Myb-like DNA-binding domain 8 55 IPR001005 -
Accr1g03516 256 ProSiteProfiles Myb-like domain profile. 56 106 IPR001005 -
Accr1g03516 256 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 3 55 IPR017930 -
Accr1g03516 256 FunFam Myb transcription factor 8 60 - -
Accr1g03516 256 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 3 128 IPR044676 GO:0003700|GO:0006355|GO:0043565
Accr1g03516 256 SMART sant 7 57 IPR001005 -
Accr1g03516 256 SMART sant 60 108 IPR001005 -
Accr1g03516 256 CDD SANT 63 106 IPR001005 -
Accr1g03516 256 ProSiteProfiles Myb-like domain profile. 3 55 IPR001005 -
Accr1g03516 256 SUPERFAMILY Homeodomain-like 6 102 IPR009057 -
Accr1g03516 256 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 56 110 IPR017930 -
Accr1g03516 256 CDD SANT 10 55 IPR001005 -
Accr1g03516 256 MobiDBLite consensus disorder prediction 112 160 - -
Accr1g03516 256 Gene3D - 8 60 - -
Accr1g03516 256 FunFam MYB transcription factor 63 129 - -
Accr1g03516 256 Gene3D - 63 134 - -
Accr1g03516 256 MobiDBLite consensus disorder prediction 115 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03516 Accr-Chr1 71623955 71624946 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03516 1 250 MYB Transcription Factor Family AT5G59780 61.355 1.27e-95 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr1g03516 Myb_DNA-binding 6.9e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03516 K09422 - qsa:O6P43_028279 360.918