Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03514 ATGCCGATTTCAAGAATTGCGATCGGAGATGCGTCTGAGTTTGGTCATGCGGATGCACTTAAGGCAGCCTTGGCCGAGTTCATCTCGATGCTCATCTTTGTCTTTGCCGGCGAAGGCTCCGGCATGGCTTACAATAAACTCACAAACAATGGTGCAGCAACACCAGCAGGGCTGGTATCAGCATCAATAGCTCATGCCCTGGCACTGTTCGTGGCGGTCTCTGTTGGCGCCAACATTTCTGGTGGTCACGTGAATCCTGCTGTTACCTTCGGTGCTTTTATTGGTGGCCACATTACCCTCCTTAGAAGCATTCTGTACTGGATCGCTCAGTTGCTAGGTTCTGTGGTTGCTTGCTTGCTACTTAAATTTGCCACTGGTGGACTGGAAACATCAGCATTTGCACTGTCTGCAGGGGTGGGAGCATGGAACGCAGTGGTATTTGAGATAGTGATGACTTTCGGTTTGGTGTACACAGTGTATGCAACAGCAGTGGACCCAAAGAAGGGAGACATAGGCATAATAGCCCCAATTGCTATTGGTTTCATAGTGGGTGCCAACATCCTAGCTGGTGGTGCCTTTGATGGTGCGTCTATGAACCCAGCTGTGTCGTTTGGGCCAGCCGTGGTTAGCTGGACTTGGTCTAACCACTGGGTCTATTGGCTCGGTCCATTCGTTGGAGCCGGTATTGCTGCCCTTGTCTATGAGATTTTCTTCATCAACCAGAACGCTCGTGAACCACTCCCCACCACTGACTATTAA 759 0.5046 MPISRIAIGDASEFGHADALKAALAEFISMLIFVFAGEGSGMAYNKLTNNGAATPAGLVSASIAHALALFVAVSVGANISGGHVNPAVTFGAFIGGHITLLRSILYWIAQLLGSVVACLLLKFATGGLETSAFALSAGVGAWNAVVFEIVMTFGLVYTVYATAVDPKKGDIGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWSNHWVYWLGPFVGAGIAALVYEIFFINQNAREPLPTTDY 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03514 252 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr1g03514 252 PRINTS Major intrinsic protein family signature 65 89 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr1g03514 252 PRINTS Major intrinsic protein family signature 180 202 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr1g03514 252 PRINTS Major intrinsic protein family signature 147 165 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr1g03514 252 PRINTS Major intrinsic protein family signature 217 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr1g03514 252 PRINTS Major intrinsic protein family signature 102 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr1g03514 252 SUPERFAMILY Aquaporin-like 17 241 IPR023271 -
Accr1g03514 252 PANTHER AQUAPORIN-8 6 245 IPR034294 -
Accr1g03514 252 FunFam Probable aquaporin TIP1-1 4 252 - -
Accr1g03514 252 CDD MIP 21 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr1g03514 252 Gene3D Glycerol uptake facilitator protein. 4 252 IPR023271 -
Accr1g03514 252 ProSitePatterns MIP family signature. 83 91 IPR022357 -
Accr1g03514 252 Pfam Major intrinsic protein 16 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03514 Accr-Chr1 71618909 71619876 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03514 1 252 Major Intrinsic Protein MIP AT4G01470 78.968 1.11e-143 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03514 K09873 - qsa:O6P43_028281 435.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g03514 1 71618909 71619876 Accr13g00196 13 1759412 1760594 CCT