Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03502 ATGAATCACACCGTCGCCGGATTCTCAGGCTCTGCCGAATACCTCGGGAATATGCCGTCGCCGGACGTCATGTCAGCTCCGACAAAGGGTTTTCAGTGCCAACCGGAGTCGGAGGTGAGCCACAGCAGTTGCAGCAGTGGGTGCAGCTGCCATGGATCGCCCACTTCCCTGACGAGTTACCAAGGCGTAATGTGTGAGAGAAGCATAAACAGCCATTCTCCGCAGAGGAGCGGGGCCCACCACCCCGCTTCTGCTCCGTTCTTCGCCGACTTGCTGGAGGAGTCGCCGTTGAGAAAAGTTTGCAGTGCCGGTGATTTGCAGAGGATGAATGTGATGCAAAAGAATGGGCGGTCAGAAAGTGGAGTGTGGAGCGAAAGCAGTATGATCATCGAAGAAATAATGAGCAAAGCGCATCCTTATAGCCCGGAGGAGAAGAAAGTGAGGATTGAGAGATACAGAATCAAGAGACATAAGAGGAACTTCAAAAAGACAATTAAGTATGTATGCAGGAAGACATTGGCGGACAGCAGGCCACGCATCAGAGGAAGATTTGCAAAGAGTGAAGAAATTGATCAGAAGAAGAGTGATGATATAATTGAGGAAGAAGATTATGAGAATTGGGACAGTTTTTTTGAAACACTGGTGGTCGCAAATCTTGTTCACCAGCCATGA 672 0.4955 MNHTVAGFSGSAEYLGNMPSPDVMSAPTKGFQCQPESEVSHSSCSSGCSCHGSPTSLTSYQGVMCERSINSHSPQRSGAHHPASAPFFADLLEESPLRKVCSAGDLQRMNVMQKNGRSESGVWSESSMIIEEIMSKAHPYSPEEKKVRIERYRIKRHKRNFKKTIKYVCRKTLADSRPRIRGRFAKSEEIDQKKSDDIIEEEDYENWDSFFETLVVANLVHQP 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03502 223 ProSiteProfiles CCT domain profile. 145 187 IPR010402 GO:0005515
Accr1g03502 223 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 36 196 IPR045281 GO:0009909
Accr1g03502 223 Pfam CCT motif 147 187 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03502 Accr-Chr1 71485957 71486913 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03502 136 199 C2C2-CO-like Transcription Factor Family AT5G24930 46.875 1.02e-12 64.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Accr1g03502 CCT 1.2e-16 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03502 - - aprc:113859774 184.496
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g03502 1 71485957 71486913 Accr1g03502 1 71485957 71486913 ECH