Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03501 ATGGAGCAGTCAGAAAAACCAGTAAAGCAATCAGCAAAAAGGTCATCATTTCCGAGAGACCCTCGTGGTTCGCTCGAAGTCTTCAACCCTTCCTCCTACTCAACGGACAATCCATCAGACTCGCCGTTCCAATCTCAGCCAAAGTGGAAAACTTGGGTGGAGCCACCAACCACTGCCACCGCCACCAACAAGGATGAGATCACCAGCACATCATGGATGGCCCTCAAGGACTCCGATAGTCCCCCGCCGCCGACTCTGTCCGCCATTCTCAACGAGCGACCTGAGCTGACCCCGAAATCTCCGTCCGCCGTGAATTTTGCCGGAGACGTGGGCACAGCTGCGCAGAGAGCCGCTGAGTGGGGACTGGTGCTGAAGACTGACATGGAGACGGGGAAGCCGCAAGGAGTGGCTGTGAGAAACTCGGGAGGAGAGGAACCAAATGCGAAGATCACGGGCACTTCGAGAAGGAACTCAAACAACTCGATGAGAAGCTCCGGCGAATCGTCAGACGACGGAGGAAAAGAAACACGGGGATTTCCGAGAATTTCAGAGGATTTGAAGGATGCTCTGTCAATGTTCCAACAGACTTTCGTGGTTTCGGATGCGACCAAACCCGATTATCCGGTCATGTACGCCAGTGCCGGATTCTTTAGGATGACCGGTTATACTTCTAAGGAGGTCATCGGGAGGAACTGTCGGTTTTTACAGGGAGCGGATACGGATCCAGAGGATGTGGCAAAGATAAGGGAGTCGCTGCAATCAGGGACGACTTACTGTGGAAGATTACTTAATTACAAGAAGGATGGCACTCCTTTCTGGAATCTCCTCACTATTTCCCCTATCAAAGACGACGATGGCAATGTCATCAAACTTATTGGAATGCAAGTGGAGGTTAGCAAGCATACGGAGGGGTCCAAGGAGAAAACGCTGCGTCCCAATGGATTGCCCGAATCTTTGATTCGATATGATGCTCGTCAAAAAGAGAAGGCTTCCTCCACCGTATCCGAGTTAGTGACGGCAGTGAGGCGGCCCCGAGCACTCAGTGAATCAGGAAAGCGTCCATTGATCAGAAAATCTGGAGGTGACGAAGAACACAGAGTAGAAAGTTTGCCAAGGAGGAAATCAGAGAGCGTTGCTTCACTAAGGCCAAAACCACATGGGGGGCATCGAAATTCAATGCAACAAATCAATGAGCTGCCTGAAAAGAAACAGAAAAGTCGTCGTCGTTCTTTCATGGGGTTCATTAAGAAAAGTCAGCCCAATGATGAAAGCCTTGAGGAGAATGAAGTTGTGGAGGGCAGTTCAGAGAGTGAGGAAGAAGATGAGAGGCCTGATAGTATTGATGATAGCAAACTTGCGCAGAGAGAGAAGCGAAAGGGTCTTGATCTTGCAACAACACTTGAACGTATTGAGAAGAACTTCGTCATTACAGATCCAAGACTGCCCGATAATCCCATTATCTTCGCATCTGATAGTTTCCTGGAACTTACAGAGTACAGTCGTGAAGAAATTTTGGGAAGAAATTGCAGGTTTTTGCAAGGACCTGAAACTGATCCAGCAACTGTGAGAAAAATTAGGGAGGCAATCGACAATCAAAGAGAAGTTACGGTGCAGCTGATTAATTATACAAAGAGTGGTAAAAAGTTCTGGAACCTGTTTCATCTGCAACCTATGCGTGACCAGAAGGGAGAAGTACAATATTTTATTGGTGTTCAACTTGATGGTAGCCAGCATGTGGAACCTCTTCATAACTGTATTGCAGAAGACACGGCAAAGGGGGGAGAACAGTTGGTTAAAAAAACTGCGGAAAATGTTGATGAGGCAGTGAGAGAACTTCCAGATGCAAATTTGAAACCAGAAGATTTATGGTTAAATCACTCAAAAGTGGTTCTTCCAAAACCTCATAGGAAGGATAACCCTGCTTGGAGAGCTATCTTGAAGATCCTAGAAAGTGGAGAACAGATAGGCTTGAAGCATTTTAGACCAGTCAAGCCTTTGGGATCTGGGGACACTGGCAGCGTGCATTTGGTGGAGCTCTGTGGAACTGGCCAATACTTTGCCATGAAGGCTATGGATAAGAGTGTTATGCTAAATCGCAACAAGGTGCATAGAGCTTGCACAGAGAGAGAAATACTCGACATGCTGGACCATCCATTTCTTCCCGCATTATATGCTTCATTTCAGACCAAGGCTCACATTTGTCTGATAACTGATTATTTTCCCGGTGGAGAATTGTTCCTGCTTCTAGACCGGCAGCCAACAAAAGTTATCAAAGAAGATGCAGCTAGGTTTTACGCTGCTGAGGTTGTGGTTGCGCTGGAGTACCTACATTGTCAAGGAATAATATATCGGGATTTGAAGCCAGAAAATGTGTTGCTCCAGGGCAATGGGCATGTGTCTCTAACAGATTTTGACTTGTCTTGTTTGACATCCAGCAAACCTCAGCTTTTATTTCCACCTTCAAATGAAAAGAAGAAACACAAAGCACAGCTGACTCCAATATTTGTTGCCGAACCTATGAGAGCATCAAATTCTTTTGTTGGCACAGAGGAGTACATAGCTCCGGAAATTATATCTGGTTCAGGCCATACTAGTGCTGTGGATTGGTGGGCTCTTGGAATTCTTCTATATGAAATGATGTACGGATATACGCCATTCAGGGGGAAGACAAGGCAAAAAACATTTGCTAATATTCTTCACAAGGATCTTAAATTTCCCAAAAGTAAACCGGTAAGTCTGCTTGCAAAGCAGTTGATACACCGGTTGTTGCACAGAGATCCCAAGAAGCGATTGGGCTCACTGGAAGGAGCAAGTGAAATAAAGCGTCACCCATTCTTCAAAGGTGTCAATTGGGCCCTCGTTCGTAGCATGAACCCTCCTGACCTGGATGCTCCTATATTTGGGGCAACTGAAGATGAGAAGAAAGTCAGAATTGTTGATCCAGCGCTGGAGGAACTGCAAACTGATTATTTCTGA 2976 0.464 MEQSEKPVKQSAKRSSFPRDPRGSLEVFNPSSYSTDNPSDSPFQSQPKWKTWVEPPTTATATNKDEITSTSWMALKDSDSPPPPTLSAILNERPELTPKSPSAVNFAGDVGTAAQRAAEWGLVLKTDMETGKPQGVAVRNSGGEEPNAKITGTSRRNSNNSMRSSGESSDDGGKETRGFPRISEDLKDALSMFQQTFVVSDATKPDYPVMYASAGFFRMTGYTSKEVIGRNCRFLQGADTDPEDVAKIRESLQSGTTYCGRLLNYKKDGTPFWNLLTISPIKDDDGNVIKLIGMQVEVSKHTEGSKEKTLRPNGLPESLIRYDARQKEKASSTVSELVTAVRRPRALSESGKRPLIRKSGGDEEHRVESLPRRKSESVASLRPKPHGGHRNSMQQINELPEKKQKSRRRSFMGFIKKSQPNDESLEENEVVEGSSESEEEDERPDSIDDSKLAQREKRKGLDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIREAIDNQREVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSQHVEPLHNCIAEDTAKGGEQLVKKTAENVDEAVRELPDANLKPEDLWLNHSKVVLPKPHRKDNPAWRAILKILESGEQIGLKHFRPVKPLGSGDTGSVHLVELCGTGQYFAMKAMDKSVMLNRNKVHRACTEREILDMLDHPFLPALYASFQTKAHICLITDYFPGGELFLLLDRQPTKVIKEDAARFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSSKPQLLFPPSNEKKKHKAQLTPIFVAEPMRASNSFVGTEEYIAPEIISGSGHTSAVDWWALGILLYEMMYGYTPFRGKTRQKTFANILHKDLKFPKSKPVSLLAKQLIHRLLHRDPKKRLGSLEGASEIKRHPFFKGVNWALVRSMNPPDLDAPIFGATEDEKKVRIVDPALEELQTDYF 991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03501 991 MobiDBLite consensus disorder prediction 1 20 - -
Accr1g03501 991 MobiDBLite consensus disorder prediction 146 167 - -
Accr1g03501 991 Pfam PAS domain 203 299 IPR000014 -
Accr1g03501 991 Pfam PAS domain 482 574 IPR000014 -
Accr1g03501 991 MobiDBLite consensus disorder prediction 27 76 - -
Accr1g03501 991 SUPERFAMILY PYP-like sensor domain (PAS domain) 475 574 IPR035965 -
Accr1g03501 991 Gene3D PAS domain 196 351 - -
Accr1g03501 991 NCBIfam PAS domain S-box protein 484 574 IPR000014 -
Accr1g03501 991 NCBIfam PAS domain S-box protein 209 302 IPR000014 -
Accr1g03501 991 ProSitePatterns Serine/Threonine protein kinases active-site signature. 781 793 IPR008271 GO:0004672|GO:0006468
Accr1g03501 991 FunFam Putative LOV domain-containing protein 744 958 - -
Accr1g03501 991 MobiDBLite consensus disorder prediction 131 179 - -
Accr1g03501 991 ProSiteProfiles PAS repeat profile. 182 253 IPR000014 -
Accr1g03501 991 SMART pac_2 259 301 IPR001610 -
Accr1g03501 991 SMART pac_2 536 578 IPR001610 -
Accr1g03501 991 ProSiteProfiles PAS repeat profile. 459 532 IPR000014 -
Accr1g03501 991 Gene3D Transferase(Phosphotransferase) domain 1 744 959 - -
Accr1g03501 991 ProSiteProfiles PAC domain profile. 256 310 IPR000700 -
Accr1g03501 991 SUPERFAMILY PYP-like sensor domain (PAS domain) 203 295 IPR035965 -
Accr1g03501 991 MobiDBLite consensus disorder prediction 1 104 - -
Accr1g03501 991 SMART pas_2 461 530 IPR000014 -
Accr1g03501 991 SMART pas_2 184 253 IPR000014 -
Accr1g03501 991 CDD PAS 474 574 IPR000014 -
Accr1g03501 991 PANTHER FLIPPASE KINASE 1-RELATED 459 964 - -
Accr1g03501 991 ProSitePatterns Protein kinases ATP-binding region signature. 666 689 IPR017441 GO:0005524
Accr1g03501 991 ProSiteProfiles Protein kinase domain profile. 660 946 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g03501 991 FunFam LOV domain-containing protein 659 743 - -
Accr1g03501 991 FunFam Putative LOV domain-containing protein 196 352 - -
Accr1g03501 991 ProSiteProfiles PAC domain profile. 533 587 IPR000700 -
Accr1g03501 991 CDD PAS 209 298 IPR000014 -
Accr1g03501 991 Gene3D PAS domain 448 612 - -
Accr1g03501 991 MobiDBLite consensus disorder prediction 343 454 - -
Accr1g03501 991 Gene3D Phosphorylase Kinase; domain 1 659 743 - -
Accr1g03501 991 Pfam Protein kinase domain 663 946 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g03501 991 MobiDBLite consensus disorder prediction 425 445 - -
Accr1g03501 991 CDD STKc_phototropin_like 658 965 - -
Accr1g03501 991 SUPERFAMILY Protein kinase-like (PK-like) 643 966 IPR011009 -
Accr1g03501 991 MobiDBLite consensus disorder prediction 346 380 - -
Accr1g03501 991 SMART serkin_6 660 946 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g03501 991 FunFam LOV domain-containing protein 448 612 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03501 Accr-Chr1 71469013 71478610 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03501 1 991 AGC Kinase Gene Family AT3G45780 70.127 0.0 1375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Accr1g03501 Pkinase 1.2e-64 CL0016