Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03498 ATGGGTTGCTTTTGTTTTGCGAAGAAATCAAGCGGAAAATCGCAGGCCAACAACTACAGCCAGAGCGCAAAGCCGAACAATCACACAGATACGTCGAAAGTTGATTTGAATGTGAATGGGAAGAAGGAAGCTCATTCTAAAGATAATCAACTTTCTCTGGACGCGAAGAGATTGAATTTAACGGACAATGGAGACACCAGTGGTAGCACGGCGCAGACTTTTACTTTTGATGAACTTGCAGAAGCGACAGGAAATTTTAGGTCAGATTGCTTTCTGGGAGAAGGAGGGTTTGGCAAGGTTTATAAGGGGCATTTGCGGGGAATAGATCAGGTTGTGGCTATAAAGCAACTTGACCCTAACGGACTTCAAGGAGTTCGGGAATTTGTTGTTGAAGTTTTGACACTTAGTCTAGCAGACCACCCTAATCTTGTGAAATTAATTGGGTTTTGTACTGATGGAGATCAGAGACTATTGGTCTATGAGCACATGCCACTAGGATCTTTGGAGAACCACTTGCATGATCTTCCACTTGGTCGAAAACCACTTGATTGGAACACGAGAATGAAAATAGCAGCTGGAGCTGCCAAGGGATTGGAGTATTTACATGAGAAAATGAAGCCCCCTGTCATATACCGTGATTTGAAATGCTCAAACATTTTACTAGGCGAGGGATATCATCCCAAGTTATCTGATTTTGGCTTGGCCAAAGTGGGCCCAAGTGGTGATAAGACACATGTTTCAACAAGGGTTATGGGCACATATGGTTACTGCGCTCCAGATTATGCTATGACGGGTCAGTTGACGTTCAAGTCAGATATCTACAGCTTTGGAGTTGTTCTCTTGGAGCTCATCACTGGCAGGAAAGCCATTGATAATACTAGACCTGCCAAAGAACAAAATCTGGTTGCATGGGCAAGGCCGTTGTTCAAAGACAGGAGGAAATTCTCCCAAATGGTAGACCCATTGCTTGAAGGCCATTATCCTGTGAGAGGTCTGTACCAAGTTCTAGCTATTGCTGCCATGTGTGTTCAAGAACAGCCTAATATGCGGCCCGTGATAACCGACGTGGTTACCGCATTAAACTACCTTGCCTCCCAAAGATATGATCCCCAAATTCATCACGTACAAAACTCCAAAAGAAGGGATGATGATCAAAGACACCTTGTTCGTGATGGTTCTTCCTCTGACTGA 1191 0.4416 MGCFCFAKKSSGKSQANNYSQSAKPNNHTDTSKVDLNVNGKKEAHSKDNQLSLDAKRLNLTDNGDTSGSTAQTFTFDELAEATGNFRSDCFLGEGGFGKVYKGHLRGIDQVVAIKQLDPNGLQGVREFVVEVLTLSLADHPNLVKLIGFCTDGDQRLLVYEHMPLGSLENHLHDLPLGRKPLDWNTRMKIAAGAAKGLEYLHEKMKPPVIYRDLKCSNILLGEGYHPKLSDFGLAKVGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDNTRPAKEQNLVAWARPLFKDRRKFSQMVDPLLEGHYPVRGLYQVLAIAAMCVQEQPNMRPVITDVVTALNYLASQRYDPQIHHVQNSKRRDDDQRHLVRDGSSSD 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03498 396 Gene3D Transferase(Phosphotransferase) domain 1 163 388 - -
Accr1g03498 396 Gene3D Phosphorylase Kinase; domain 1 58 162 - -
Accr1g03498 396 FunFam probable serine/threonine-protein kinase RLCKVII 59 162 - -
Accr1g03498 396 MobiDBLite consensus disorder prediction 10 33 - -
Accr1g03498 396 MobiDBLite consensus disorder prediction 9 33 - -
Accr1g03498 396 ProSiteProfiles Protein kinase domain profile. 86 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g03498 396 MobiDBLite consensus disorder prediction 375 396 - -
Accr1g03498 396 SUPERFAMILY Protein kinase-like (PK-like) 72 374 IPR011009 -
Accr1g03498 396 ProSitePatterns Serine/Threonine protein kinases active-site signature. 209 221 IPR008271 GO:0004672|GO:0006468
Accr1g03498 396 Pfam Protein tyrosine and serine/threonine kinase 91 359 IPR001245 GO:0004672|GO:0006468
Accr1g03498 396 SMART serkin_6 86 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g03498 396 ProSitePatterns Protein kinases ATP-binding region signature. 92 115 IPR017441 GO:0005524
Accr1g03498 396 CDD STKc_IRAK 92 361 - -
Accr1g03498 396 FunFam Serine/threonine-protein kinase PBS1 163 378 - -
Accr1g03498 396 PANTHER OS07G0668900 PROTEIN 18 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03498 Accr-Chr1 71456414 71459548 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03498 1 365 Glycoside Hydrolase AT3G07070 56.065 1.33e-145 418
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Accr1g03498 PK_Tyr_Ser-Thr 1.1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03498 - - gmx:100804000 625.165