Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03493 ATGTTCGATCTTAATCTGAATGCCGATTCGACTGATACTGCTTATAAACATGAATCCCTCAAGTTCTCCGACGAGCTAACGGAAGCCTCCGGGAATCAAATGGCGAAATCGGGGACTTCCAATTCCTCTAATGTCTATGCTGACGGGTCCAGCAATGGAGGAGATGAGGACTCCTGCTCTACACGCGGTGGGGACGTCTTCACCTTTAATTTCGATATCCTTAAGGAGGAAGGCGTGAAAGAAGTCCCAGACAAGGAATTATTTCTGTCTAGTGAAACTAAAGGAGTGGACGGCGAGTCCACGAATTGGCAGGGTCAGTTTTTGTCTGCCCTTCCATCGAGAAGGAGCTGGATGAGTCTTTCCTTTGATCATCAGGGTGGTAACGGAGAGATGAAGATGGTCCAGGTTCAGCAAAAACCTCCTCAACCGCAAGTGAAGAAAAGCAGACGGGGTCCAAGGTCTCGAAGCTCGCAATACAGAGGCGTCACCTTTTACAGGAGGACTGGAAGATGGGAATCGCATATCTGGGATTGCGGGAAACAAGTCTATTTGGGTGGGTTTGATACCGCTGATGCCGCTGCCAGAGCCTACGATCGTGCTGCTATTAAGTTTAGGGGAGTTGATGCTGACATCAATTTCAATCTCAATGATTACGAGGAGGATCTTATGCAGATGAAAAATCTCTCCAAAGAGGAATTCGTGCACATACTTCGTCGCCAGAGTACTGGTTTCTCAAGGGGGAGTTCAAAATACCGAGGAGTAACACTGCACAAGTGTGGTCGTTGGGAAGCTCGAATGGGACAATTCCTTGGCAAAAAGGCTTATGATAAGGCGGCTATCAAATGCAACGGAAGGGAGGCAGTGACCAACTTTGAATTAAGAACATACGAAGGAGAGATGAAGCCTGAGGTCATTACTGAAGGTGGCGGTCGCAATCTTGACCTCAACTTGGGCATAGCAACACCAGGCAGTGGGCCGGTAGAAAATAGGGGCTATCAGTTACAACCTATCCCTTACAACATGCATACCGGAAGAATTTCAAGGAAGGAGATCAATATTGATTCAGTAAATGGTGATCAATCGTTGAAAAGGCCAGTTGTTACTGAGGAACGTCCTTCTGTATGGAATGGCATCTATCCTAGTTTCTTTCCCAATGAGGAAAGGGCTGAGAGAATAGGGAGAGATCATTCACAAGGACTGCCTCGATGGGGTTGGCAAACGCAAGGCCAGGTTGCTGCTACGCCAGTACCCCCGTTCTCTGCTGCAGCATCATCAGGATTCTCAATTTCAGCTAACTTTCCTTTGGCTACCATCTTTCCATCAAAATCTTTGAGTTTGAACTCAATTCCCCATGATATCTGTTTTGATCCGTCTGGCAGCGACACAAATCAACATTGCCAGACCAAGCCCCCGCACGGCCCCCTCTGA 1428 0.4769 MFDLNLNADSTDTAYKHESLKFSDELTEASGNQMAKSGTSNSSNVYADGSSNGGDEDSCSTRGGDVFTFNFDILKEEGVKEVPDKELFLSSETKGVDGESTNWQGQFLSALPSRRSWMSLSFDHQGGNGEMKMVQVQQKPPQPQVKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTADAAARAYDRAAIKFRGVDADINFNLNDYEEDLMQMKNLSKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKAYDKAAIKCNGREAVTNFELRTYEGEMKPEVITEGGGRNLDLNLGIATPGSGPVENRGYQLQPIPYNMHTGRISRKEINIDSVNGDQSLKRPVVTEERPSVWNGIYPSFFPNEERAERIGRDHSQGLPRWGWQTQGQVAATPVPPFSAAASSGFSISANFPLATIFPSKSLSLNSIPHDICFDPSGSDTNQHCQTKPPHGPL 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03493 475 CDD AP2 158 213 IPR001471 GO:0003700|GO:0006355
Accr1g03493 475 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 121 324 - -
Accr1g03493 475 MobiDBLite consensus disorder prediction 31 58 - -
Accr1g03493 475 MobiDBLite consensus disorder prediction 136 159 - -
Accr1g03493 475 Pfam AP2 domain 158 206 IPR001471 GO:0003700|GO:0006355
Accr1g03493 475 SMART rav1_2 158 220 IPR001471 GO:0003700|GO:0006355
Accr1g03493 475 SMART rav1_2 250 298 IPR001471 GO:0003700|GO:0006355
Accr1g03493 475 CDD AP2 249 292 IPR001471 GO:0003700|GO:0006355
Accr1g03493 475 Gene3D AP2/ERF domain 157 216 IPR036955 GO:0003700|GO:0006355
Accr1g03493 475 SUPERFAMILY DNA-binding domain 249 293 IPR016177 GO:0003677
Accr1g03493 475 SUPERFAMILY DNA-binding domain 157 215 IPR016177 GO:0003677
Accr1g03493 475 FunFam AP2-like ethylene-responsive transcription factor 157 216 - -
Accr1g03493 475 ProSiteProfiles AP2/ERF domain profile. 158 214 IPR001471 GO:0003700|GO:0006355
Accr1g03493 475 MobiDBLite consensus disorder prediction 31 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03493 Accr-Chr1 71414940 71418594 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03493 1 273 AP2-EREBP Transcription Factor Family AT2G28550 64.516 3.31e-90 274
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr1g03493 AP2 7.5e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03493 K09284 - gmx:100788303 583.563