Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03490 ATGGCACAGTTCATTGATAACATTCCGTCGATGGATCTGATGCGCTCGGAGAAGATGACCTTTGCTCAACTCATCATCCCTGTCGAGTCCGCTCACCGGGCCGTCTCTTATTTGGGTGAACTCGGCCTCTTCCAATTCCGAGATTTAAATGAAAATAAAAGCCCTTTCCAGAGAACATTTATTAACCAGGTCAAGCGATGTGCAGAAATGTCAAGAAAGTTACGATTCTTCAAAGATCAAATCAGTAAAGCTGGTCTTATGTCTTCTCCTCATTCTGTTTTGCAACCAGATATTGAATTGGAGGAATTAGAGTATCAACTTGCTGAGCATGAACATGAGCTAATTGAACTGAACTCTAACAGCGAGAAACTTCGTCAATCATATAATGAGCTCCTGGAGTTTAAGATTGTTTTGCAGAAGGCATTTGGTTTTCTGGCCTCAAACCATAGCCATGAATTTTCAGAGAGGGAGCTGGAGGAGAATGTATACTTAAATGATGGTTATTTTGACACAGCATCTCCACTTGAGAAGGAATTGAAGCCTGGATCATCATATCAATCTGGTTTAAGATTCATCAGCGGAATGATCTGTAAATCCAAGGTTCTTAGGTTTGAAAGGATGTTGTTTCGAGCTACAAGAGGCAATATGCTTTTCAATCAGGCTGCAGCCGATGAGCTAATAGAGGATCCTGTATCAAATGAGAAGATTGAAAAAACAGTGTTTGTCGTGTTTTTCTCTGGGGAGCAGGCAAGAACAAAGATTCTTAAAATCTGCGAGTCATTTGGTGCTAATTGCTACCCTGTCCCTGAAGATATAAGTAAACAAAGACAAATAAGTGGGGAGGTCTCAACACGCCTTTCTGACTTGGAGACGACTCTAGATGCTGGGATAAGGCACCGGAATAAGGCCCTTGCTTCTGTAGAATGTCATCTAGCAAAATGGATGAACATGGTAAGAAGAGAGAAGGCTGTGTATGATACCCTGAACATGTTAAATTTTGATGTCACCAAAAAATGCCTCGTTGGAGAGGGTTGGTGCCCTGTATTTGCAAAATTGCAGATTCAGGAGGCACTGCAGCGTGCAACTTTAGATAGCAGCTCTCAAGTTGGCATAATCTTCCATCCAATGGATGCAGCGGAGTCACCACCCACATATTTTAGGACCAACCGCTTTACAAGTGCATATCAGGAAATTGTTGATGCATATGGCGTTGCAAGATACGAAGAAGCAAATCCTGCAGTTTACACAGTTATTACATTCCCGTTTCTTTTTGCGGTAATGTTTGGGGACTGGGGTCATGGAATTTGCTTGTTGCTGGGAGCATTGGTTCTTATAGCACGGGAAAGCAGGCTCAGCAAGGAGAGACTTGGAAGCTTTATGGAGATGCTATTTGGTGGCCGTTATGTGCTCCTTTTGATGTCGCTGTTTTCAATCTATTGTGGGTTAATCTACAATGAATTCTTCTCTGTTCCTTTTCACATTTTTGGAAAGTCTGCTTACTCATGCCGAGATGCTTCGTGCCGGGATGCACACACTGCTGGCTTAGTCAAATTACGAGATCCATATCCATTTGGCGTGGACCCCAGCTGGCGTGGAAGTCGTTCAGAATTGGCTTTTCTCAACTCTCTCAAGATGAAGATGTCCATTCTTTTAGGTGTGGCGCAGATGAACTTAGGGATTATATTAAGTTACTTCAATGCGCATTATTTTAGCAGCTCAGTGGATATAAGGTACCAGTTTGTGCCACAGATGATTTTTCTGAACAGTCTGTTTGGGTATCTTTCTCTTCTCATTGTCATTAAGTGGTGCAATGGTTCTCAGGCAGACCTCTATCATGTAATGATTTACATGTTTCTTAGCCCCACTGATAATCTTGGTGAGAATCAGTTGTTCAGGGGCCAAAGGCCACTTCAAATTGTGTTATTGCTTTTGGCTTTAATCGCAGTTCCTTGGATGCTGTTTCCAAAACCCTTTATCCTTAAGAAGCTTCACCATGAGAGATTTCAAGGACGCACTTATGGCATGCTAACTACCTCTGAGATGGATCTCGAGGAGGAACCAGATTCTGCCAGGCAACATGATGAGGAATTCAACTTCAGTGAGGTCTTTGTTCATCAAATGATCCACTCTATTGAATTTGTTCTAGGTGCAGTTTCAAATACTGCATCATATCTTCGACTTTGGGCATTAAGCTTGGCCCACTCAGAGCTTTCAACTGTGTTTTATGAGAAAGTACTAGTTCTTGCTTGGGGGTATGACAATCTTGTTATCCGGTTAGTGGGGCTAGCCGTTTTTGCCTTCGCAACTGCCTTTATTCTTCTCATGATGGAAACCCTCAGCGCTTTTCTTCATGCCCTGCGTCTCCACTGGGTAGAATTTCAAAATAAATTCTACCATGGTGATGGCTACAAGTTCAGACCCTTTTCCTTTGCCTCGTTAACAGAGGACGATGATTGA 2457 0.4257 MAQFIDNIPSMDLMRSEKMTFAQLIIPVESAHRAVSYLGELGLFQFRDLNENKSPFQRTFINQVKRCAEMSRKLRFFKDQISKAGLMSSPHSVLQPDIELEELEYQLAEHEHELIELNSNSEKLRQSYNELLEFKIVLQKAFGFLASNHSHEFSERELEENVYLNDGYFDTASPLEKELKPGSSYQSGLRFISGMICKSKVLRFERMLFRATRGNMLFNQAAADELIEDPVSNEKIEKTVFVVFFSGEQARTKILKICESFGANCYPVPEDISKQRQISGEVSTRLSDLETTLDAGIRHRNKALASVECHLAKWMNMVRREKAVYDTLNMLNFDVTKKCLVGEGWCPVFAKLQIQEALQRATLDSSSQVGIIFHPMDAAESPPTYFRTNRFTSAYQEIVDAYGVARYEEANPAVYTVITFPFLFAVMFGDWGHGICLLLGALVLIARESRLSKERLGSFMEMLFGGRYVLLLMSLFSIYCGLIYNEFFSVPFHIFGKSAYSCRDASCRDAHTAGLVKLRDPYPFGVDPSWRGSRSELAFLNSLKMKMSILLGVAQMNLGIILSYFNAHYFSSSVDIRYQFVPQMIFLNSLFGYLSLLIVIKWCNGSQADLYHVMIYMFLSPTDNLGENQLFRGQRPLQIVLLLLALIAVPWMLFPKPFILKKLHHERFQGRTYGMLTTSEMDLEEEPDSARQHDEEFNFSEVFVHQMIHSIEFVLGAVSNTASYLRLWALSLAHSELSTVFYEKVLVLAWGYDNLVIRLVGLAVFAFATAFILLMMETLSAFLHALRLHWVEFQNKFYHGDGYKFRPFSFASLTEDDD 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03490 818 PANTHER VACUOLAR PROTON ATPASES 13 817 IPR002490 GO:0033179|GO:0046961|GO:1902600
Accr1g03490 818 Coils Coil 100 127 - -
Accr1g03490 818 Pfam V-type ATPase 116kDa subunit family 37 810 IPR002490 GO:0033179|GO:0046961|GO:1902600
Accr1g03490 818 PIRSF ATP6V0A1 9 818 IPR026028 GO:0000220|GO:0046961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03490 Accr-Chr1 71366236 71374290 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03490 1 811 Primary Pumps ATPases(2) AT2G28520 78.160 0.0 1320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03490 K02154 - zju:107411281 1431.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g03490 1 71366236 71374290 Accr13g00246 13 2355298 2363957 CCT
Accr1g03490 1 71366236 71374290 Accr1g03490 1 71366236 71374290 ECH