Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03484 ATGGAGGGCAGTGACGCAAACATGGGTCTTTCACAATCTCCCACTAATTCCTCCTCTGCTTCCGTTCCCACCCCACAAGTCATCGCAAGCCCTTGCGCTGCCTGCAAGATTCTCCGGCGCCGATGTGCCGACAAATGCGTTTTAGCTCCCTATTTCCCTCCCACCGACCCCCACAAGTTCACCATCGCCCACCGTGTCTTCGGCGCCAGTAACATCATCAAGTTCTTGCAGGATCTCCCGGAGAATCAGAGAGCTGATGCAGTGAGCAGTATGGTGTACGAGGCAAGTGCAAGACTCAGAGACCCCATATATGGCTGTGCTGGTGCCATTTGCCAGCTTCAAAAGCAAGTGAATGAGCTTCAAGCACAGCTCGCCAAGTCTCAAGCAGAGCTCGTCAATATGCAACTACAGCAAGGCAATCTGGTGGCTCTCATTTGCATGGAAATGTCTCAGACCTCTTTCACTCCTCAGCAATCTGAATCGCCACAGCATTCCGTTGACGAGTTTATTTCAACTCCTCCACACACCAACGCCTATCAGAGCAATCTAAACTTCTTCGACGACAACACCAGCTTTAACTCACTCTGGGAGCCTCTCTGGACTTGA 606 0.5165 MEGSDANMGLSQSPTNSSSASVPTPQVIASPCAACKILRRRCADKCVLAPYFPPTDPHKFTIAHRVFGASNIIKFLQDLPENQRADAVSSMVYEASARLRDPIYGCAGAICQLQKQVNELQAQLAKSQAELVNMQLQQGNLVALICMEMSQTSFTPQQSESPQHSVDEFISTPPHTNAYQSNLNFFDDNTSFNSLWEPLWT 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03484 201 Pfam Lateral organ boundaries (LOB) domain 31 128 IPR004883 -
Accr1g03484 201 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 30 162 - -
Accr1g03484 201 Coils Coil 110 137 - -
Accr1g03484 201 ProSiteProfiles LOB domain profile. 30 131 IPR004883 -
Accr1g03484 201 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03484 Accr-Chr1 71331827 71332515 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03484 27 201 AS2 family AT2G28500 65.054 7.04e-80 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Accr1g03484 LOB 4.9e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03484 - - gmx:100789504 305.834
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g03484 1 71331827 71332515 Accr13g00254 13 2460913 2461988 CCT
Accr1g03484 1 71331827 71332515 Accr1g03484 1 71331827 71332515 ECH