Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03481 ATGGATTTAGTCAATAGTTGCAAGGAAAAGTTGACATATTTTCGGATAAAAGAGCTCAAAGATGTACTCACTCAGTTAGGCCTTTCAAAACAGGGAAAAAAGCAGGATCTTGTTGATCGGATATTAGCCATTATCTCAGATGAACAAGTTTCCAAATTGTGGGCTAAAAAGAATGCTGTTGGAAAAGAACAGGTGGCAAAATTAGTGGATGACACATATAGAAAGATGCAGATATCTGGAGCAACTGAGCTGGCGACAAAGGGTATGTCAGATAGCAGTAATGTGAAAATTAAAGGTGAAGTTGAAGATTCCTTGCAGTCAGTTACAAAGATTCGCTGTCTCTGTGGAAGTTCTTTGGAAACTGAGGCATTGATCAAGTGTGAGGATACAAGATGTCAAGTGTGGCAACACATGAGTTGTGTTTTAATCCCAGAGAAACCTACAGAACCCATCCCACCAGTTCCTGATAAATTCTATTGTGAGATCTGCCGTCTCAGTCGTGCTGACCCTTTTTGGGTTCCAGTGGCACATCCTTTGTTTCCTGTGAAGTTGAACACGGCCAATGTTCCAGCTGATGGCACTAACCCTGTGCAGAGTGTGGAGAGATCATTTCAACTTACAAGAGCAGACAAGGACTTGGTGTCTAAACCAGAATTTGATGTTCAGGCTTGGTGCATGCTTCTGAATGACAAGGTCCCATTCAGGATGCAGTGGCCTCAATATACAGATCTACAGGTCAATGGTGTACCTGTTCGTGCCATCAACAGACCTGGTTCACAATTACTTGGGGCTAATGGTCGAGATGATGGTCCAATTATCACGCCATATACAAAAGATGGAATAAACAAGATTTCCTTAACAGGGTGTGATGCTCGCCTTTTCTGTTTGGGGGTTCGTATTGTGAAAAGGCGAACCGTGGAACAGATCCTGAGCATAATTCCAAAAGAGTCTGATGGTGAGCCTTTTGAAGATGCTCTTGCACGTGTTTGCCGATGTGTTGGTGGTGGGAATGCAGCTGATAATGCTGATAGTGACAGTGATTTAGAAGTCGTTTCGGATACTTTTAGCATCAACCTCCGTTGTCCAATGAGTGGTTCAAGGATGAAGGTTGCTGGAAGATTCAAGCCTTGTGTTCACATGGGGTGTTTTGATCTTGAAGTTTTTGTGGAAATGAATCAGCGGTCAAGGAAGTGGCAATGTCCCATCTGTCTCAAAAATTATACATTGGAGAATATCATTATAGACCCTTACTTCAACCGTATCACATCTCAGATGATAAGTTGCGGTGAAGATGTGACAGAGGTTGAAGTGAAGCCTGATGGTTCTTGGCGTGTCAAGGCTAAGAGTGAAGTTGAACGGCGAGATTTGGGTAATGTTGCACAATGGCACTTTCCTGATGGATCACTGTGTGTTTCTACTGACGAAGAAGTCAATAGAGTGGATGCATTTAAGCAGATCAAGCAGGAGGGTGTTTCTGACAGTCCTACTGGTTTAAAACTTGGCATAAGGAAGAATCATGATGGAGTTTGGGTTTTCAGCAAAGCCAGTGACACCAATACATCATCAGGCAATAGATTGAAAGAGAACCCTGGAAATCATGACCAGGTGGTTATTCCAATGAGCAGCAGTGCCACTGAGAGTGGCCATGAGGGTGATGACCCTAGTGTAAATCAGGGTGGTGGTGGACTTGATTTCTCTAACAATGGGACGGAAATGGATTCTTTCTACCAGTACGGGTTTGCAGAAAATAACACTGCTGCTCGAACTGGGGATGCTGAAGTTATTGTTCTAAGTGATTCTGAGGAAGAGAATGACAGGTTGGTATCTTCAGCAACTGACTACAAGAATAATCGAACTGATGCTGTTGGTGTTGGTTACTCTGTGCCACCTTCTGGAATTGCTGATTCACATGCTGAAGATCCCACCCTTGGTGGCTTGGGACTTTTTAATTCTAATGAAGATGAATTTGAGATGCCTCCTTCCCTTTGGTCATCATTGCCTTCTGGAACTCAGGCAGGTGCAGGATTTCAGTTTTTCACTTCTGATGCAGATGTGTCAGATGCATTGGTCCATCTGCAGCATGGTCCTGTTAATTGTTCCACATCACTCAACGGTTATGCATTGGCACCGGATGCTGCTCTGGGATCTAGCGCACTCATGCCAGATGCCTCTGTGGGTCGGTCTGATGCTGCTGATTTAAACGGTGGATTAGTTGACAATCCACTGGCATTTGCTGGAGATGATCCCTCACTCCAAATATTTCTCCCCACTAGACCTGTTGAATCATCTGGGCAGCATGAATTGAGAGACCAGGCAGATGTGTCTAATGGTGTCTGCAATGAGGATTGGATTTCTCTCAGGCTTGGAGGTGGTGCTAGTGGTAATAACAGCCATGCTACGACTCCAAATGGTCTGAATTCTAGACAGCAAATTCTATCCAGAGAACCTTCCACAGATGCTATGGCTGATACTGGAGTGACAAGTCAGCAATCATGA 2496 0.4411 MDLVNSCKEKLTYFRIKELKDVLTQLGLSKQGKKQDLVDRILAIISDEQVSKLWAKKNAVGKEQVAKLVDDTYRKMQISGATELATKGMSDSSNVKIKGEVEDSLQSVTKIRCLCGSSLETEALIKCEDTRCQVWQHMSCVLIPEKPTEPIPPVPDKFYCEICRLSRADPFWVPVAHPLFPVKLNTANVPADGTNPVQSVERSFQLTRADKDLVSKPEFDVQAWCMLLNDKVPFRMQWPQYTDLQVNGVPVRAINRPGSQLLGANGRDDGPIITPYTKDGINKISLTGCDARLFCLGVRIVKRRTVEQILSIIPKESDGEPFEDALARVCRCVGGGNAADNADSDSDLEVVSDTFSINLRCPMSGSRMKVAGRFKPCVHMGCFDLEVFVEMNQRSRKWQCPICLKNYTLENIIIDPYFNRITSQMISCGEDVTEVEVKPDGSWRVKAKSEVERRDLGNVAQWHFPDGSLCVSTDEEVNRVDAFKQIKQEGVSDSPTGLKLGIRKNHDGVWVFSKASDTNTSSGNRLKENPGNHDQVVIPMSSSATESGHEGDDPSVNQGGGGLDFSNNGTEMDSFYQYGFAENNTAARTGDAEVIVLSDSEEENDRLVSSATDYKNNRTDAVGVGYSVPPSGIADSHAEDPTLGGLGLFNSNEDEFEMPPSLWSSLPSGTQAGAGFQFFTSDADVSDALVHLQHGPVNCSTSLNGYALAPDAALGSSALMPDASVGRSDAADLNGGLVDNPLAFAGDDPSLQIFLPTRPVESSGQHELRDQADVSNGVCNEDWISLRLGGGASGNNSHATTPNGLNSRQQILSREPSTDAMADTGVTSQQS 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03481 831 CDD SP-RING_Siz-like 358 407 IPR031141 -
Accr1g03481 831 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 101 169 IPR013083 -
Accr1g03481 831 ProSiteProfiles SAP motif profile. 11 45 IPR003034 -
Accr1g03481 831 MobiDBLite consensus disorder prediction 514 552 - -
Accr1g03481 831 FunFam E3 SUMO-protein ligase SIZ2 331 445 - -
Accr1g03481 831 Pfam MIZ/SP-RING zinc finger 357 405 IPR004181 GO:0008270
Accr1g03481 831 SUPERFAMILY FYVE/PHD zinc finger 108 167 IPR011011 -
Accr1g03481 831 Gene3D SAP domain 1 62 IPR036361 -
Accr1g03481 831 ProSiteProfiles Zinc finger SP-RING-type profile. 344 427 IPR004181 GO:0008270
Accr1g03481 831 SMART sap_9 11 45 IPR003034 -
Accr1g03481 831 Pfam SAP domain 14 42 IPR003034 -
Accr1g03481 831 Coils Coil 597 617 - -
Accr1g03481 831 Pfam PHD-finger 112 164 IPR019787 -
Accr1g03481 831 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 335 445 IPR013083 -
Accr1g03481 831 SUPERFAMILY SAP domain 1 64 IPR036361 -
Accr1g03481 831 SMART PHD_3 112 164 IPR001965 -
Accr1g03481 831 PANTHER ZINC FINGER MIZ DOMAIN-CONTAINING PROTEIN 9 627 - -
Accr1g03481 831 MobiDBLite consensus disorder prediction 514 568 - -
Accr1g03481 831 CDD PHD_Bye1p_SIZ1_like 112 163 - -
Accr1g03481 831 FunFam E3 SUMO-protein ligase SIZ1 1 66 - -
Accr1g03481 831 ProSitePatterns Zinc finger PHD-type signature. 113 163 IPR019786 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03481 Accr-Chr1 71300099 71307912 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Accr1g03481 PHD 7.2e-07 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03481 - - gmx:100793735 1248.03