Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03478 ATGGAAATTGATCTGAACCATGCAGTGAACGAGGTTGAAAAGAATGCCTTCTGTGATGGGCACTGTCAGCAAGGCGCTTGTGCTTCATGTTTCTACTCTTCCACTTCTCCATCTTCCAATTCGCCTTCACCTCGTGTGTCTTCTTCTTATCTTGAACTCTGGCATGCTTGTGCTGGTCCCCTCACATCCCTCCCTAACAAAGGAAATGTAGTAGTCTACTTTCCCCAAGGTCATCTTGAACAGCTTGCCTCTTTCTCTCCTTTCTCCCCCATGGACATGCCCACCTATGACCTTCAACCACAAATCTTCTGCAGGGTCGTCAATGTCCAGCTTCTTGCCAACAAGGAGAATGATGAGGTTTATACGCAGGTTACTTTGCTTCCCCAGGCAGAGTTAGCAGGGGTGAACTTGGAGGGCCAAGAACTTGAGAAATTGGGAGCATTTGAGGAGGAAAATGGAGGATTACCTGCAAAATCAACTCCTCACATGTTCTGCAAAACGCTTACTGCTTCTGATACTAGCACTCACGGGGGTTTCTCTGTTCCTCGCAGAGCTGCTGAGGACTGCTTTCCTCCTTTGGATTATAAGCAGCAAAGACCTTCCCAAGAGCTTGTTGCAAAAGACCTGCATGGAGTGGAGTGGAAATTTCGCCATATTTACAGAGGTCAGCCAAGACGGCATCTGCTCACAACTGGCTGGAGTATTTTTGTCAGCCAAAAGAATCTTGTATCTGGCGATGCAGTACTCTTTCTGAGGGGTGAAAGTGGAGAACTGAGGTTGGGAATCAGGAGATCTGTTCGACCTAGAAATGGTCTTCCCGAGTCAGTTATTGGTGATCAGAATTGCTATCCCAATTTCCTATCTTCAGTTGCTAATGCTATAACCACCAAAAGCGTGTTTCATGTTTTCTACAGCCCAAGGGCAAGTCATGCAGAGTTTGTTGTCCCCTACCAGAAATATGTCAAAAGCATCAAGAATCCAATGACCATTGGGACTAGATTTAAGATGAAATTTGAAATGGATGAATCTCCCGAAAGAAGGTGTAATGGTGGTATGGTGACTGGAATGCGTGATTTGGATCCCTATAGATGGCCTAAATCAAAATGGAGGTGCTTGATGGTAAGATGGGATGAGGATATTGCTACGAATCATCAAGATCGAATTTCTCCATGGGAGATTGAGCCTTCTGTTTCTCTCCCACCCTTGAGCATTCAGTCGTCCCCAAGACTAAAGAAATTGCGGCAAGGTCTGCAAGTTACTACATCGAGTCACCTCATGACCGGTGGCGGTGCATTTATGGACTTCGAGGAGTCTGTAATGTCACCCAAGGTCTTGCAAGGTCAAGAAAATACAGGTTTTGCATCATACTATTTTGGGCGTGATGCAGTGACCAACCAGCCAGATTTTGAGATGAGTCCTCTTAGTCATCCAAATCTTGCATCGACTGGATTAAGAAAAGCTACCGCTGCTGAACTTATGAGGGTTCACCCTTCTAGTTATGCAGGCTTTGCGGAGACTAACAAGTTTCTGAGGGTCTTGCAAGGTCAAGAAATATGTCCACTGCAATCCCTGAAAGGAAAGGCTGATTTTAACCTTGGGGCTTGGGGTGAACCCAATGCCAGTTGCACAACTCTCAACCACCGTCAGGCATCCAAACCCAACTTCAACACTTTAGGATCAGAAGGCCTTCAAACTGCTTATTTTCCTTACGGTGACATTCACCGGGCTGGTCAAAGTAGCCTGTTGTGTTCTAAACCTGCAAATTTCCAGAGAGAGAATGTCCACACTCCTTCCACTCAGGCAGAGCTCTCAACAAAGGAAGTTGGACGGTCAGATTCCTCAGACAAGGATAAGCTGCAGGACAGTTTTTCTGCTGCTGCTTTAGGAGCAAGTCTAAGGATTCCAAATGATGAAACTTTTGAGGTGAAGATAAATGCCTGCAAACTATTTGGGTTCCCCTTATCTGGGGAAGGCAACTCTCAGAATTTACAGAGCTCTGCTAAAAGGAGTTGCACAAAGGTTCACAAGCAAGGTAGCTTAGTTGGAAGAGCCATTGATCTCTCAAGACTGAGCAGCTACAATGATCTGTTGAGTGAACTAGAGCGACTGTTTGGGATGGAAGGCCTTATAAAGGATCCTGATAAAGGATGGCGGGTCCTGTACACCGATAGTGAAAATGATATAATGGTCGTAGGGGATGACCCATGGCATGAGTTCTGCAGCGTGGTGTCTAAGATCCACATATATACCCAAGAAGAAGTGGATAAGATGACCATTGGGATGATCACTGATGATACACAGAGCTGTTTGGAACAGGCACCGGGAGTAATGGAGGCTTCCAAGTCATCATCTGTGGGCCAGCCAGATTCTTCTCCGACAGGAGCCTGA 2388 0.4606 MEIDLNHAVNEVEKNAFCDGHCQQGACASCFYSSTSPSSNSPSPRVSSSYLELWHACAGPLTSLPNKGNVVVYFPQGHLEQLASFSPFSPMDMPTYDLQPQIFCRVVNVQLLANKENDEVYTQVTLLPQAELAGVNLEGQELEKLGAFEEENGGLPAKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWKFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGESGELRLGIRRSVRPRNGLPESVIGDQNCYPNFLSSVANAITTKSVFHVFYSPRASHAEFVVPYQKYVKSIKNPMTIGTRFKMKFEMDESPERRCNGGMVTGMRDLDPYRWPKSKWRCLMVRWDEDIATNHQDRISPWEIEPSVSLPPLSIQSSPRLKKLRQGLQVTTSSHLMTGGGAFMDFEESVMSPKVLQGQENTGFASYYFGRDAVTNQPDFEMSPLSHPNLASTGLRKATAAELMRVHPSSYAGFAETNKFLRVLQGQEICPLQSLKGKADFNLGAWGEPNASCTTLNHRQASKPNFNTLGSEGLQTAYFPYGDIHRAGQSSLLCSKPANFQRENVHTPSTQAELSTKEVGRSDSSDKDKLQDSFSAAALGASLRIPNDETFEVKINACKLFGFPLSGEGNSQNLQSSAKRSCTKVHKQGSLVGRAIDLSRLSSYNDLLSELERLFGMEGLIKDPDKGWRVLYTDSENDIMVVGDDPWHEFCSVVSKIHIYTQEEVDKMTIGMITDDTQSCLEQAPGVMEASKSSSVGQPDSSPTGA 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03478 795 SUPERFAMILY CAD & PB1 domains 672 748 - -
Accr1g03478 795 Gene3D - 664 758 - -
Accr1g03478 795 MobiDBLite consensus disorder prediction 593 617 - -
Accr1g03478 795 FunFam Auxin response factor 327 400 - -
Accr1g03478 795 Pfam AUX/IAA family 663 753 IPR033389 -
Accr1g03478 795 MobiDBLite consensus disorder prediction 775 795 - -
Accr1g03478 795 CDD B3_DNA 162 264 IPR003340 GO:0003677
Accr1g03478 795 MobiDBLite consensus disorder prediction 777 795 - -
Accr1g03478 795 Gene3D - 328 400 - -
Accr1g03478 795 SUPERFAMILY DNA-binding pseudobarrel domain 156 274 IPR015300 -
Accr1g03478 795 ProSitePatterns 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 22 30 IPR006058 GO:0051537
Accr1g03478 795 SMART B3_2 164 266 IPR003340 GO:0003677
Accr1g03478 795 FunFam Auxin response factor 664 758 - -
Accr1g03478 795 Pfam Auxin response factor 290 372 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Accr1g03478 795 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 49 758 IPR044835 GO:0003677|GO:0006355|GO:0009725
Accr1g03478 795 FunFam Auxin response factor 162 266 - -
Accr1g03478 795 Gene3D - 162 266 IPR015300 -
Accr1g03478 795 ProSiteProfiles B3 DNA-binding domain profile. 164 266 IPR003340 GO:0003677
Accr1g03478 795 ProSiteProfiles PB1 domain profile. 669 753 IPR000270 GO:0005515
Accr1g03478 795 MobiDBLite consensus disorder prediction 593 607 - -
Accr1g03478 795 Pfam B3 DNA binding domain 164 265 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03478 Accr-Chr1 71278724 71284391 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03478 47 793 B3 DNA Binding Superfamily AT5G60450 60.927 0.0 859
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Accr1g03478 AUX_IAA 4.5e-07 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03478 - - gmx:100812909 1241.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g03478 1 71278724 71284391 Accr1g03478 1 71278724 71284391 ECH