Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03477 ATGGAAATTGATCTGAACCATGCAGTGAACGAGGTTGAAAAGAATGCCTTCTGTGATGGGCACTGTCAGCAAGGCGCTTGTGCTTCATGTTTCTACTCTTCCACTTCTCCATCTTCCAATTCGCCTTCACCTCGTGTGTCTTCTTCTTATCTTGAACTCTGGCATGCTTGTGCTGGTCCCCTCACATCCCTCCCTAACAAAGGAAATGTAGTAGTCTACTTTCCCCAAGGTCATCTTGAACAGCTTGCCTCTTTCTCTCCTTTCTCCCCCATGGACATGCCCACCTATGACCTTCAACCACAAATCTTCTGCAGGGTCGTCAATGTCCAGCTTCTTGCCAACAAGGAGAATGATGAGGTTTATACGCAGGTTACTTTGCTTCCCCAGGCAGAGTTAGCAGGGGTGAACTTGGAGGGCCAAGAACTTGAGAAATTGGGAGCATTTGAGGAGGAAAATGGAGGATTACCTGCAAAATCAACTCCTCACATGTTCTGCAAAACGCTTACTGCTTCTGATACTAGCACTCACGGGGGTTTCTCTGTTCCTCGCAGAGCTGCTGAGGACTGCTTTCCTCCTTTGGATTATAAGCAGCAAAGACCTTCCCAAGAGCTTGTTGCAAAAGACCTGCATGGAGTGGAGTGGAAATTTCGCCATATTTACAGAGGTCAGCCAAGACGGCATCTGCTCACAACTGGCTGGAGTATTTTTGTCAGCCAAAAGAATCTTGTATCTGGCGATGCAGTACTCTTTCTGAGGGGTGAAAGTGGAGAACTGAGGTTGGGAATCAGGAGATCTGTTCGACCTAGAAATGGTCTTCCCGAGTCAGTTATTGGTGATCAGAATTGCTATCCCAATTTCCTATCTTCAGTTGCTAATGCTATAACCACCAAAAGCGTGTTTCATGTTTTCTACAGCCCAAGGGCAAGTCATGCAGAGTTTGTTGTCCCCTACCAGAAATATGTCAAAAGCATCAAGAATCCAATGACCATTGGGACTAGATTTAAGATGAAATTTGAAATGGATGAATCTCCCGAAAGAAGGTGTAATGGTGGTATGGTGACTGGAATGCGTGATTTGGATCCCTATAGATGGCCTAAATCAAAATGGAGGTGCTTGATGGTAAGATGGGATGAGGATATTGCTACGAATCATCAAGATCGAATTTCTCCATGGGAGATTGAGCCTTCTGTTTCTCTCCCACCCTTGAGCATTCAGTCGTCCCCAAGACTAAAGAAATTGCGGCAAGGTCTGCAAGTTACTACATCGAGTCACCTCATGACCGCAGGTGGCGGTGCATTTATGGACTTCGAGGAGTCTGTAATGTCACCCAAGGTCTTGCAAGGTCAAGAAAATACAGGTTTTGCATCATACTATTTTGGGCGTGATGCAGTGACCAACCAGCCAGATTTTGAGATGAGTCCTCTTAGTCATCCAAATCTTGCATCGACTGGATTAAGAAAAGCTACCGCTGCTGAACTTATGAGGGTTCACCCTTCTAGTTATGCAGGCTTTGCGGAGACTAACAAGTTTCTGAGGGTCTTGCAAGGTCAAGAAATATGTCCACTGCAATCCCTGAAAGGAAAGGCTGATTTTAACCTTGGGGCTTGGGGTGAACCCAATGCCAGTTGCACAACTCTCAACCACCGTCAGGCATCCAAACCCAACTTCAACACTTTAGGATCAGAAGGCCTTCAAACTGCTTATTTTCCTTACGGTGACATTCACCGGGCTGGTCAAAGTAGCCTGTTGTGTTCTAAACCTGCAAATTTCCAGAGAGAGAATGTCCACACTCCTTCCACTCAGGCAGAGCTCTCAACAAAGGAAGTTGGACGGTCAGATTCCTCAGACAAGGATAAGCTGCAGGACAGTTTTTCTGCTGCTGCTTTAGGAGCAAGTCTAAGGATTCCAAATGATGAAACTTTTGAGGTGAAGATAAATGCCTGCAAACTATTTGGGTTCCCCTTATCTGGGGAAGGCAACTCTCAGAATTTACAGAGCTCTGCTAAAAGGAGTTGCACAAAGGTTCACAAGCAAGGTAGCTTAGTTGGAAGAGCCATTGATCTCTCAAGACTGAGCAGCTACAATGATCTGTTGAGTGAACTAGAGCGACTGTTTGGGATGGAAGGCCTTATAAAGGATCCTGATAAAGGATGGCGGGTCCTGTACACCGATAGTGAAAATGATATAATGGTCGTAGGGGATGACCCATGGCATGAGTTCTGCAGCGTGGTGTCTAAGATCCACATATATACCCAAGAAGAAGTGGATAAGATGACCATTGGGATGATCACTGATGATACACAGAGCTGTTTGGAACAGGCACCGGGAGTAATGGAGGCTTCCAAGTCATCATCTGTGGGCCAGCCAGATTCTTCTCCGACAGGAGCCTGA 2391 0.4609 MEIDLNHAVNEVEKNAFCDGHCQQGACASCFYSSTSPSSNSPSPRVSSSYLELWHACAGPLTSLPNKGNVVVYFPQGHLEQLASFSPFSPMDMPTYDLQPQIFCRVVNVQLLANKENDEVYTQVTLLPQAELAGVNLEGQELEKLGAFEEENGGLPAKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWKFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGESGELRLGIRRSVRPRNGLPESVIGDQNCYPNFLSSVANAITTKSVFHVFYSPRASHAEFVVPYQKYVKSIKNPMTIGTRFKMKFEMDESPERRCNGGMVTGMRDLDPYRWPKSKWRCLMVRWDEDIATNHQDRISPWEIEPSVSLPPLSIQSSPRLKKLRQGLQVTTSSHLMTAGGGAFMDFEESVMSPKVLQGQENTGFASYYFGRDAVTNQPDFEMSPLSHPNLASTGLRKATAAELMRVHPSSYAGFAETNKFLRVLQGQEICPLQSLKGKADFNLGAWGEPNASCTTLNHRQASKPNFNTLGSEGLQTAYFPYGDIHRAGQSSLLCSKPANFQRENVHTPSTQAELSTKEVGRSDSSDKDKLQDSFSAAALGASLRIPNDETFEVKINACKLFGFPLSGEGNSQNLQSSAKRSCTKVHKQGSLVGRAIDLSRLSSYNDLLSELERLFGMEGLIKDPDKGWRVLYTDSENDIMVVGDDPWHEFCSVVSKIHIYTQEEVDKMTIGMITDDTQSCLEQAPGVMEASKSSSVGQPDSSPTGA 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03477 796 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 49 759 IPR044835 GO:0003677|GO:0006355|GO:0009725
Accr1g03477 796 Gene3D - 665 759 - -
Accr1g03477 796 FunFam Auxin response factor 327 400 - -
Accr1g03477 796 Pfam AUX/IAA family 664 754 IPR033389 -
Accr1g03477 796 Gene3D - 162 266 IPR015300 -
Accr1g03477 796 CDD B3_DNA 162 264 IPR003340 GO:0003677
Accr1g03477 796 Gene3D - 328 400 - -
Accr1g03477 796 SUPERFAMILY DNA-binding pseudobarrel domain 156 274 IPR015300 -
Accr1g03477 796 MobiDBLite consensus disorder prediction 776 796 - -
Accr1g03477 796 ProSitePatterns 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 22 30 IPR006058 GO:0051537
Accr1g03477 796 SMART B3_2 164 266 IPR003340 GO:0003677
Accr1g03477 796 MobiDBLite consensus disorder prediction 778 796 - -
Accr1g03477 796 FunFam Auxin response factor 665 759 - -
Accr1g03477 796 SUPERFAMILY CAD & PB1 domains 673 749 - -
Accr1g03477 796 MobiDBLite consensus disorder prediction 594 608 - -
Accr1g03477 796 Pfam Auxin response factor 290 372 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Accr1g03477 796 FunFam Auxin response factor 162 266 - -
Accr1g03477 796 ProSiteProfiles PB1 domain profile. 670 754 IPR000270 GO:0005515
Accr1g03477 796 ProSiteProfiles B3 DNA-binding domain profile. 164 266 IPR003340 GO:0003677
Accr1g03477 796 MobiDBLite consensus disorder prediction 594 618 - -
Accr1g03477 796 Pfam B3 DNA binding domain 164 265 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03477 Accr-Chr1 71278724 71284391 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03477 47 794 B3 DNA Binding Superfamily AT5G60450 60.795 0.0 858
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Accr1g03477 AUX_IAA 4.5e-07 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03477 - - gmx:100812909 1245.72