Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03474 ATGGAAGGAGAATACCAAACTGGGTCTATGTTTCCCCCTGGATTCAGGTTCCATCCTTCTGATCAAGAACTCATAATTCATTACTTAAAAAATAAAATAACCTCTCGCCCACTTCCAGCATTGATTATTGCAGAAATTGATCTGTACAAGTATAACCCATGGGAGTTACCCAAAAAGGCATTTTTTGGGGAGGATGAATGGTATTTCTTTAGCCCCAGAGACCGAAAGTACCCAAATGGATTGAGACCAAACAGAGCAGCAGCTTCAGGATATTGGAAAGCTACTGGTACAGACAGGCCTATACTTAGCTCTTGCGGATCAAAGCGCATAGGAGTGAAGAAAGCTCTTGTTTTTTACACAGGTCGTCCGCCCAGAGGGACTAAGACTGATTGGATTATGAATGAATACAGATTGACTGACACAACCACCAAACCTTCCAGGCTTAAAAGTTCCATGCGACTGGATGACTGGGTGCTATGTCGGGTTCGACACAAAGGCTACTCATCAAGGAATTCTGGTGAGAATCAGGAGCATCATTTTGGACCAAGCTTGCAGGCAAACCTTGCTGGCTGCAACCAATTCCCAGGAAACACAGACCTTGGAGCTAACATGTTCACAAATCATCAGTACAAAGACTATCGAATCTTAGCCTCTATTCTTGTTGGGGAATCTGTACTTCCCATAGAGAACAAGTCAAGTGTGAGCTTTAAAGGCAGCAAAGGCGACAGCCTCAGTTCAGTGTACAGCTCCTTCGACACCTTGAGTACAAAATCTAATGAAGATAATCAATACGACCATCTCATTTCTTTTAATAGGGAGTTTCACTTTGAGAACAAAACAGATCATTTTACTAGCAAGGTGTTGACGAGTTGTGACATGTACTGCTATAGTCGAAATCAGTCTCAAGAAGGCATCCTCAATGAGACTCCGCCAGATCCTACCATCAATTTTGAAGAACTTAACAAATTGGCCTCCACAGAAAGATACTCACCGGAAATAGCATTGCCTTTAAGGGTGCAGACAAGTTGTTGCTCTACGTTTCCTTGTTCATAG 1053 0.4274 MEGEYQTGSMFPPGFRFHPSDQELIIHYLKNKITSRPLPALIIAEIDLYKYNPWELPKKAFFGEDEWYFFSPRDRKYPNGLRPNRAAASGYWKATGTDRPILSSCGSKRIGVKKALVFYTGRPPRGTKTDWIMNEYRLTDTTTKPSRLKSSMRLDDWVLCRVRHKGYSSRNSGENQEHHFGPSLQANLAGCNQFPGNTDLGANMFTNHQYKDYRILASILVGESVLPIENKSSVSFKGSKGDSLSSVYSSFDTLSTKSNEDNQYDHLISFNREFHFENKTDHFTSKVLTSCDMYCYSRNQSQEGILNETPPDPTINFEELNKLASTERYSPEIALPLRVQTSCCSTFPCS 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03474 350 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 10 258 - -
Accr1g03474 350 Pfam No apical meristem (NAM) protein 12 138 IPR003441 GO:0003677|GO:0006355
Accr1g03474 350 Gene3D NAC domain 20 168 IPR036093 GO:0003677|GO:0006355
Accr1g03474 350 ProSiteProfiles NAC domain profile. 11 165 IPR003441 GO:0003677|GO:0006355
Accr1g03474 350 FunFam NAC domain-containing protein 72-like 20 170 - -
Accr1g03474 350 SUPERFAMILY NAC domain 8 165 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03474 Accr-Chr1 71251605 71253341 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03474 11 174 NAC Transcription Factor Family AT1G61110 68.605 6.09e-82 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Accr1g03474 NAM 7.4e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03474 - - gmx:100817193 459.144