Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03465 ATGATTTCCGCCAAAATGTCGAAAGCAGGAAACCGAATGAGCAATGGGCGAAGCTCAAAAACAGCGAGTAAAGCAAGTAAGCCTCGAAAAGAGGGCTTGACGAAGACGAATAAACGCGGCGATAGCAATGTGAAGGACGATAAAGTTTCAATCTTTCCATCATCTGCCATTACCACCGAGCTCTTAGAAGGAGGGAAAGGGCCTGAAATTGACGACAATGGTGCCACAAATGGGCGAACCAACGAAACGAGACCCAAGAAAGGTAAACGGAAGCAACAAGATGACGATTATAAAGTTGAAGAGGAAGAAAACGCAAAAACGGACGAGCTTCCGATAAGTCGAATCAAGAGAATAATGAAGGCAGAAGATCCCGAGCTACGTGTTTCTGAGGAAGCCATCTTTGTCATCAGCAAAGCTACGGTGAAATTCCTTAAACAATTCACGCGGGAATCTCATGCTTGTTCAGTTCAGGATCGAAAGAAATTTCTTGGTTACCAGCGCCTGTCTTATGTTGTTAGTAAGCAGAGGAGATATGACTTTCTTTTAGATTATGTCCCTGAGAAACTAAAAGCTGAGGATGCATTAAGAAAGAGAGCAGCAATTGCGAGGACCTGA 615 0.439 MISAKMSKAGNRMSNGRSSKTASKASKPRKEGLTKTNKRGDSNVKDDKVSIFPSSAITTELLEGGKGPEIDDNGATNGRTNETRPKKGKRKQQDDDYKVEEEENAKTDELPISRIKRIMKAEDPELRVSEEAIFVISKATVKFLKQFTRESHACSVQDRKKFLGYQRLSYVVSKQRRYDFLLDYVPEKLKAEDALRKRAAIART 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03465 204 MobiDBLite consensus disorder prediction 1 106 - -
Accr1g03465 204 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 109 169 IPR003958 -
Accr1g03465 204 MobiDBLite consensus disorder prediction 24 46 - -
Accr1g03465 204 Gene3D Histone, subunit A 74 187 IPR009072 GO:0046982
Accr1g03465 204 MobiDBLite consensus disorder prediction 87 106 - -
Accr1g03465 204 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 89 197 - -
Accr1g03465 204 MobiDBLite consensus disorder prediction 8 22 - -
Accr1g03465 204 SUPERFAMILY Histone-fold 110 186 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03465 Accr-Chr1 71206097 71208244 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03465 77 169 CCAAT-HAP5 Transcription Factor Family AT1G07980 33.333 7.99e-13 62.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Accr1g03465 CBFD_NFYB_HMF 3.9e-12 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03465 - K03506 pcin:129316088 303.523