Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03463 ATGGGTTGTTGTTGTAACTGCTTCTGGTTCACCCGAAAATCTAAGCAGCCCAGTGCTAAGTTTGGTATCAATAATAATCTCTCTCAGGAGCTGTTGTTGGATGAAGACATCGAAGACGATGGCTCATATGATGGTGATGTTACTAACATCAGCAGTGGAGATGATAATGAAGTACAAATTCATGCCAACCGGTCTGAGGATATTTTGAAATGGAGAGCAGAGAATGACATGATTTGTAGGCAGTTTCCTGTTAAGGAAACTCACAAAGTTGTTCGCACAAAGGATGAAAATGGAAACAAGATGATCAATGAGTATGTTCGTGAATATAAGATAGGTTCTGGTAGCTATGGGAAAGTGGTTTTATATCAAAGTTCTGTAGATGGCAAGCACTATGCAATCAAGGTTTTTCATAAGTCTCATTTACTGAAGGTTCGAGTTGCAGCCTCAGAGACTGCCATGACAGATGTTCTGCGCGAGGTACTTATCATGAAAACAGTGGAACATCCTAACATAGTCAATCTCATTGAGGTGATTGATGACCCAGAGTCAGATCAATTTTACATGGTACTTGAATATGTGGAAGGCAAATGGGTCTGTGAGGGTACAGGACCTATTTGTGGCTTAGGTGAAGAGACTGCTAGGAGATATTTGCGTGACATTGTTTCAGGATTAATGTATCTTCATGATCATAATATTGTGCATGGGGATATTAAACCTGATAATCTGTTGGTAACTCGCCATGGGATGGTGAAGATAGGGGATTTCAGTGTCAGCCAGGCATTTGAGGATGATAATGATGAACTCCGTCGGTCCCCTGGCACTCCTGTTTTCACTGCACCAGAATGTTGTTTGGGTCTTACCTATCGTGGTAGAGCTGCAGACACATGGGCAGTAGGAGTTACTTTGTACTGTATGATCCTGGGTGAATATCCTTTTCTAGGTGATACTCTTCCAGATACTTACGATAAAATAGTCAATAACCCTTTAGTCCTCCCAGATAATTTGAACCTGCAAGTGAAGAACTTGCTAGAAGGACTACTTTGCAAAGATCCAGAACTAAGGTTGACATTAGGTGATGTTGCAAAGCATAGCTGGTTTATAGGAAACGATGGGCCAATTCCTGAGTACTTGTGTTGGTGTAAACGTAAGACCTTGGAGAGGGAAGACTTAGATGGGAGCAACATACTTGCTTGA 1194 0.4154 MGCCCNCFWFTRKSKQPSAKFGINNNLSQELLLDEDIEDDGSYDGDVTNISSGDDNEVQIHANRSEDILKWRAENDMICRQFPVKETHKVVRTKDENGNKMINEYVREYKIGSGSYGKVVLYQSSVDGKHYAIKVFHKSHLLKVRVAASETAMTDVLREVLIMKTVEHPNIVNLIEVIDDPESDQFYMVLEYVEGKWVCEGTGPICGLGEETARRYLRDIVSGLMYLHDHNIVHGDIKPDNLLVTRHGMVKIGDFSVSQAFEDDNDELRRSPGTPVFTAPECCLGLTYRGRAADTWAVGVTLYCMILGEYPFLGDTLPDTYDKIVNNPLVLPDNLNLQVKNLLEGLLCKDPELRLTLGDVAKHSWFIGNDGPIPEYLCWCKRKTLEREDLDGSNILA 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03463 397 PANTHER MAP/MICROTUBULE AFFINITY-REGULATING KINASE 65 368 - -
Accr1g03463 397 ProSitePatterns Protein kinases ATP-binding region signature. 111 134 IPR017441 GO:0005524
Accr1g03463 397 ProSiteProfiles Protein kinase domain profile. 105 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g03463 397 FunFam Serine/threonine-protein kinase GRIK2 95 395 - -
Accr1g03463 397 Gene3D Phosphorylase Kinase; domain 1 99 201 - -
Accr1g03463 397 SUPERFAMILY Protein kinase-like (PK-like) 95 378 IPR011009 -
Accr1g03463 397 CDD STKc_LKB1_CaMKK 111 366 - -
Accr1g03463 397 SMART serkin_6 105 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g03463 397 ProSitePatterns Serine/Threonine protein kinases active-site signature. 232 244 IPR008271 GO:0004672|GO:0006468
Accr1g03463 397 FunFam Serine/threonine-protein kinase Ssp1 99 201 - -
Accr1g03463 397 Pfam Protein kinase domain 105 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g03463 397 Gene3D Transferase(Phosphotransferase) domain 1 206 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03463 Accr-Chr1 71181099 71185362 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03463 100 373 CBL-interacting serine-threonine protein kinases AT5G35410 33.942 2.09e-45 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-LKB Accr1g03463 Pkinase 2.1e-56 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03463 K00908 - gmx:100776013 635.565