Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03451 ATGAAGGAAGTTGGCAAGAGCTTGGATCCGCAACTCTGGCACGCGTGTGCCGGTAGTATGGTTCAAATGCCTCCGGTGAACTCCAGAGTCTTTTACTTTCCTCAAGGCCACGCTGAGCACGCTCAGGCCAACCTTAATTTTCCACCCTCCTTAAGGATTCCACCGCTTATTCTTTGTCGTGTGGTATCGGTGAAATTCTTGGCCGACCCAGAAACCGATGAAGTTTTTGCCAAGATAAGGTTGGTTCCTTTGAGAAATTCCGACCTCGATTTCGACGACGATGGGGTTACGGACGTTAATGGATCGGAGAATTCAGAAAAGCCAGCATCTTTTGCCAAGACATTAACCCAATCTGATGCGAACAATGGTGGGGGCTTCTCTGTTCCAAGGTACTGCGCAGAAACTATCTTCCCACGGCTGGATTACTCTGCTGAACCGCCGGTTCAAACTGTGGCTGCCAAGGACGTTCACGGCGAAACTTGGAATTTCAGACACATATACAGGGGAACACCTCGTCGGCACTTACTAACCACTGGGTGGAGCACTTTCGTGAACCAAAAGAAACTTGTTGCTGGGGATTCTATTGTTTTCTTGAGGGCTGAAAACGGCGACCTCTGTGTTGGAATTCGCCGAGCAAAACGTGGTGGTTTTGGCAGCCGGATGCAAACTCCGTCAGCCGGTTGGCGTGGTGGTGCCGCTGGAGGTGGTGTGGGGCCTTTAGGGGGCTTCTCTTATTTCTTGAGAGAGGAGAACAAGTTACTGCCTAATGCTTGTGGGAATTCAAATCCTGGAAGAGCAAAAGTGAGGCCTGAATCTGTGATGGAAGCTATGACACTGGCAGCTAGTGGTCAGGCATTTGAAGTAGTTTATTATCCTCGAGCCAGTACTCCTGAGTTTTGTATTAAGGCTGCATCTGTGAGGGCTGCCATGAGAACTCAATGGTGCTATGGCATGAGGTTCAAGATGGCCTTTGAGACTGAGGATTCTTCTAGAATTAGCTGGTTCATGGGGACCATTTCTTCTGTTCAGGTCGTCGATCCAGTGCGTTGGCCCAACTCTCCCTGGCGTCTTCTTCAGGTTACCTGGGATGAACCAGATTTGCTGCAGAATGTGAAGCGTGTTAGCCCATGGTTGGTAGAATTGGTATCAAACATGCCAGTCATTCATTTCACGCCTTTTTCTACGCCAAGGAAGAAGCTGCGGCTTCCACAGCACTCGGACTTCCACCTTGATGGCCAATTTTCAATACCGACATTTTCAGGCAACCCTCTTGGGATTAGCAGCCCCTCGTGTTGTCTATCCGATAATGCTCCTGCAGGCATACAGGGAGCCAGGCATGCTCAATTCGGAATATCTCTCTCAGATCTCCACCTTAACAATAAACTACAGCTGGGGTCACTTCCAACTAACATCCAGCAGCTTGATATACATCCTGGGATGTCCAATGGCAAGATGGCAAACAATGGCGACAACAATGAAAGCTTGTCCTGCTTGCTGACCATGGGAAATTCTTTCAAGAGTTTGGAGAAATCTGATAATGTGAAGAGACACCGGTTTTTTCTTTTTGGTCAACCAATACTCACTGAGCAACAAATCTCTCGAAGCTGTTCTAGTGATAAGTTGTCTCAGAATGTTAGTGAAAAAGATTTGCCAGATGAAAATAGAGACAAGACAATGTGCAAATTGGGTGATTCGCATTCTGGTCTTTCTCAGCAGTTTCCACCTGGAAAATCTTCTAATGTTGAGTATTCTTGGCAACTAGGCTTGGATAATGGTCATTGCAAGGTTTTCATGGAATCTGAGGACGTGGGACGGACCCTTGACCTATCATGTCTTGGTTCCTATGAAGAGCTATACAGAAGACTGGCCAACATGTTTGGAATTGAAAGATCTACAATGTTGCGTCATGTACTCTACTATGATGCTTCAGGTGCTGTTAAGCAAACTGGACTAGAACCCTTCAGCGACTTCATGAAAACAGCAAAAAGATTGACAATTCTGACCGATTCAAGCAGCAAAGAGTTTTAA 2028 0.4689 MKEVGKSLDPQLWHACAGSMVQMPPVNSRVFYFPQGHAEHAQANLNFPPSLRIPPLILCRVVSVKFLADPETDEVFAKIRLVPLRNSDLDFDDDGVTDVNGSENSEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTVAAKDVHGETWNFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAENGDLCVGIRRAKRGGFGSRMQTPSAGWRGGAAGGGVGPLGGFSYFLREENKLLPNACGNSNPGRAKVRPESVMEAMTLAASGQAFEVVYYPRASTPEFCIKAASVRAAMRTQWCYGMRFKMAFETEDSSRISWFMGTISSVQVVDPVRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHFTPFSTPRKKLRLPQHSDFHLDGQFSIPTFSGNPLGISSPSCCLSDNAPAGIQGARHAQFGISLSDLHLNNKLQLGSLPTNIQQLDIHPGMSNGKMANNGDNNESLSCLLTMGNSFKSLEKSDNVKRHRFFLFGQPILTEQQISRSCSSDKLSQNVSEKDLPDENRDKTMCKLGDSHSGLSQQFPPGKSSNVEYSWQLGLDNGHCKVFMESEDVGRTLDLSCLGSYEELYRRLANMFGIERSTMLRHVLYYDASGAVKQTGLEPFSDFMKTAKRLTILTDSSSKEF 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03451 675 ProSiteProfiles B3 DNA-binding domain profile. 111 213 IPR003340 GO:0003677
Accr1g03451 675 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 6 671 IPR044835 GO:0003677|GO:0006355|GO:0009725
Accr1g03451 675 Gene3D - 590 675 - -
Accr1g03451 675 Gene3D - 314 386 - -
Accr1g03451 675 SMART B3_2 111 213 IPR003340 GO:0003677
Accr1g03451 675 FunFam Auxin response factor 109 213 - -
Accr1g03451 675 ProSiteProfiles PB1 domain profile. 591 671 IPR000270 GO:0005515
Accr1g03451 675 SUPERFAMILY DNA-binding pseudobarrel domain 105 212 IPR015300 -
Accr1g03451 675 Pfam Auxin response factor 276 359 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Accr1g03451 675 FunFam Auxin response factor 314 387 - -
Accr1g03451 675 Pfam B3 DNA binding domain 111 212 IPR003340 GO:0003677
Accr1g03451 675 CDD B3_DNA 110 211 IPR003340 GO:0003677
Accr1g03451 675 Gene3D - 109 213 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03451 Accr-Chr1 71079953 71082814 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03451 6 673 B3 DNA Binding Superfamily AT4G30080 58.616 0.0 741
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Accr1g03451 B3 1e-21 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03451 - - pcin:129315672 1209.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g03451 1 71079953 71082814 Accr13g00307 13 2980587 2983371 CCT
Accr1g03451 1 71079953 71082814 Accr1g03451 1 71079953 71082814 ECH