Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03450 ATGAAGGATCCTTTGTTTTTGGACAAGAGTTTCAATGGTCTACCGGATGAAATCTTTGATGATGTCATAAAGTTCTTTGATTTTCCGCTGGAAGATGTGGATGCTAACATTGCGGAAGAAGAAGACTGGGATGCCCAATTTAAACGCATCGAAGAGCCATCTTTTGATGTGTTCTCGGTATCATCGTCTGAATTGTCCGGTAAAACTCAAAATGACAATTTACACCTTGGGAATGGGAGGACTTCCTCTGCTTGTAAGGAGACTTCAGCCCCAGTTGCCAAGCCTAACATCTACCTCAAAAAGAAGGATCAGCCCCAGTTTCGAACCTACAGCCCAGTTTCTGTATTTGAAAGCACTACATCTTCCTCTGGTGAAAGTTCCAACTTTGAACTGCCCATCATCCCGGGGAAGCGCCCTCGAGGGAGGCGCCGGCGTCTCTCCAGCTTCACCTCTCTATTGCCAATCCGGTTGGCACTGCGAAAATCTCAAAAGGGAGCTGCCGCAGTAGAGCTATTAAATGGGGTGAAGAGGAAGCAGAGGACGAAGGATCTCTCCATTCTCTCAAGTGAAGTCAAGATGAAGAAATCATCATTAAGAGATTCAGGTGCGCCTACAAAATGCATGCATTGTGAAGCGACCAAGACCCCACAGTGGAGGGAGGGACCTATGGGTCCAAAGACTCTGTGTAATGCATGTGGGGTTCGATACAGGTCAGGTCGCTTGTTCCCCGAATACCGCCCTGCGGCTAGTCCCACTTTTGTACCATCTCTGCATTCCAACTCTCACAAGAAGGTCATAGAGATGAGAAACTCGGTCATGCAAGAGTCTGGGGCTTCTATTTTGGGTTTGTCATCGATCTAA 861 0.4739 MKDPLFLDKSFNGLPDEIFDDVIKFFDFPLEDVDANIAEEEDWDAQFKRIEEPSFDVFSVSSSELSGKTQNDNLHLGNGRTSSACKETSAPVAKPNIYLKKKDQPQFRTYSPVSVFESTTSSSGESSNFELPIIPGKRPRGRRRRLSSFTSLLPIRLALRKSQKGAAAVELLNGVKRKQRTKDLSILSSEVKMKKSSLRDSGAPTKCMHCEATKTPQWREGPMGPKTLCNACGVRYRSGRLFPEYRPAASPTFVPSLHSNSHKKVIEMRNSVMQESGASILGLSSI 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03450 286 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 203 264 - -
Accr1g03450 286 SMART GATA_3 201 251 IPR000679 GO:0006355|GO:0043565
Accr1g03450 286 CDD ZnF_GATA 206 253 IPR000679 GO:0006355|GO:0043565
Accr1g03450 286 Gene3D - 198 276 IPR013088 GO:0006355|GO:0008270
Accr1g03450 286 Pfam GATA zinc finger 207 240 IPR000679 GO:0006355|GO:0043565
Accr1g03450 286 ProSiteProfiles GATA-type zinc finger domain profile. 201 237 IPR000679 GO:0006355|GO:0043565
Accr1g03450 286 ProSitePatterns GATA-type zinc finger domain. 207 232 IPR000679 GO:0006355|GO:0043565
Accr1g03450 286 PANTHER GATA TRANSCRIPTION FACTOR 35 272 - -
Accr1g03450 286 FunFam GATA transcription factor 197 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03450 Accr-Chr1 71067709 71070278 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03450 11 281 C2C2-Gata Transcription Factor Family AT1G08010 36.986 1.07e-49 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Accr1g03450 GATA 5.1e-16 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03450 - - gmx:100778675 275.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g03450 1 71067709 71070278 Accr1g03450 1 71067709 71070278 ECH