Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Accr1g03449 | ATGTCAGAGGACATTACAAACATGAAGGATCCTTTGTTTTTGGACAAGAGTTTCAATGGTCTACCGGATGAAATCTTTGATGATGTCATAAAGTTCTTTGATTTTCCGCTGGAAGATGTGGATGCTAACATTGCGGAAGAAGAAGACTGGGATGCCCAATTTAAACGCATCGAAGAGCCATCTTTTGATGTGTTCTCGGTATCATCGTCTGAATTGTCCGGTAAAACTCAAAATGACAATTTACACCTTGGGAATGGGAGGACTTCCTCTGCTTGTAAGGAGACTTCAGCCCCAGTTGCCAAGCCTAACATCTACCTCAAAAAGAAGGATCAGCCCCAGTTTCGAACCTACAGCCCAGTTTCTGTATTTGAAAGCACTACATCTTCCTCTGGTGAAAGTTCCAACTTTGAACTGCCCATCATCCCGGGGAAGCGCCCTCGAGGGAGGCGCCGGCGTCTCTCCAGCTTCACCTCTCTATTGCCAATCCGGTTGGCACTGCGAAAATCTCAAAAGGGAGCTGCCGCAGTAGAGCTATTAAATGGGGTGAAGAGGAAGCAGAGGACGAAGGATCTCTCCATTCTCTCAAGTGAAGTCAAGATGAAGAAATCATCATTAAGAGATTCAGGTGCGCCTACAAAATGCATGCATTGTGAAGCGACCAAGACCCCACAGTGGAGGGAGGGACCTATGGGTCCAAAGACTCTGTGTAATGCATGTGGGGTTCGATACAGGTCAGGTCGCTTGTTCCCCGAATACCGCCCTGCGGCTAGTCCCACTTTTGTACCATCTCTGCATTCCAACTCTCACAAGAAGGTCATAGAGATGAGAAACTCGGTCATGCAAGAGTCTGGGGCTTCTATTTTGGGTTTGTCATCGATCTAA | 882 | 0.4717 | MSEDITNMKDPLFLDKSFNGLPDEIFDDVIKFFDFPLEDVDANIAEEEDWDAQFKRIEEPSFDVFSVSSSELSGKTQNDNLHLGNGRTSSACKETSAPVAKPNIYLKKKDQPQFRTYSPVSVFESTTSSSGESSNFELPIIPGKRPRGRRRRLSSFTSLLPIRLALRKSQKGAAAVELLNGVKRKQRTKDLSILSSEVKMKKSSLRDSGAPTKCMHCEATKTPQWREGPMGPKTLCNACGVRYRSGRLFPEYRPAASPTFVPSLHSNSHKKVIEMRNSVMQESGASILGLSSI | 293 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Accr1g03449 | 293 | Gene3D | - | 205 | 283 | IPR013088 | GO:0006355|GO:0008270 | |
Accr1g03449 | 293 | ProSiteProfiles | GATA-type zinc finger domain profile. | 208 | 244 | IPR000679 | GO:0006355|GO:0043565 | |
Accr1g03449 | 293 | SMART | GATA_3 | 208 | 258 | IPR000679 | GO:0006355|GO:0043565 | |
Accr1g03449 | 293 | FunFam | GATA transcription factor | 204 | 286 | - | - | |
Accr1g03449 | 293 | ProSitePatterns | GATA-type zinc finger domain. | 214 | 239 | IPR000679 | GO:0006355|GO:0043565 | |
Accr1g03449 | 293 | CDD | ZnF_GATA | 213 | 260 | IPR000679 | GO:0006355|GO:0043565 | |
Accr1g03449 | 293 | PANTHER | GATA TRANSCRIPTION FACTOR | 42 | 279 | - | - | |
Accr1g03449 | 293 | SUPERFAMILY | Glucocorticoid receptor-like (DNA-binding domain) | 210 | 271 | - | - | |
Accr1g03449 | 293 | Pfam | GATA zinc finger | 214 | 247 | IPR000679 | GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Accr1g03449 | Accr-Chr1 | 71066725 | 71070278 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Accr1g03449 | 18 | 288 | C2C2-Gata Transcription Factor Family | AT1G08010 | 36.986 | 1.17e-49 | 165 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2C2-GATA | Accr1g03449 | GATA | 5.3e-16 | CL0167 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Accr1g03449 | - | - | gmx:100778675 | 285.804 |