Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03443 ATGGCTTTATTTTCTTTCTTTATTGTGTATGGGTTGGAAAAGATGAAGCTGCAATTCAAAATTGCCCTTGCTTTTGTTATTAGCTTGCTCTGGATTCAGTCCTCATTCTGTGGAGGACCTTCTGGGAGCCTAAACAAATGGATATGTAGATGTTCTTTTCAAGGGAACCAGAGTTCCTCTCTTGCTAACTGTTCTACATCATGTGATTGCCGTTTAGATGCCAAAGAGAGTGAATCCTTATGGACATGCTTATGTGACCCCAACAGTTTTCCTAATGTGGAAGCAGATGGTCATAGTTCAAATTGCTTTACTGCCTGCAACTGCACCTGGGGAGTTCTCATCATCTCACAAGGTTCAAAGAAACACATTTCCAGCAAGATCGTCATAATTATACTATTACTATGTGTTATCTGCACAACTGTTGCATTTCTTGCCTCAATCATATGCTATGCATACCGAAGGAACAAGTGTCCTATTCAATCACCCATATTCTCATCAGACAACGAAACAAGTTACAATAGCACTGCCATCTTAATTAGTAACAGAACTTCAGTGCCAGAAACAAAAGCTACTACAAATTCTGCTATTAATCTGATCCCAGGATGTTTTCAGATGTCCTCTTTCTTGTGTGGGAGCAAAGGAGAAACTTTTCATGGAAATATTATTCAATTTTCATTTGCTGTACTAGAAAACGCCACTGAAAAATTTTCAGCTTCCAACCTGATTGGACTGGGCAGAAGTAGTTATGTATATCGTGGTAGACTGAAGAGTGGTATTAATGTGGCAGTGAAGCGACTAAAAGCTCAAGGGGGGGCTGAAGCAAACTCTGAGTTCTTGACAGAGATTGAACTATTATCTAGACTTCATCATTGTCACTTGGTGCCTTTGCTTGGGTACTGCTTAGAATCAAAAGGAAGATATGTTGAGAGGCTACTTGTATTGAAGTACATGGCCAATGGTAATTTGAGGGACTGTTTGGATGGAGTTTCTGGGAAATGTCCGGATTGGGCTACACGTGTTACGGTGGCAATGGGAGCTGCATGGGGATTGGAATACCTACATGAAGCAGCTGCTCCGAGAATTATGCATAGAGATATTAAATCAACAAACATTCTTCTGGATGAAAATTATCAAGCCAAAATTACCGATCTTGGTATGGCTAAAAACTTAAGAACTGATGACTTCCCCAGCTGTTCAAATTCTCCAGCGAGAATGCAGGGAACATTTGGTTATTTTGCACCTGAGTATGCAATTGTTGGAAGAGCCTCTCTTAAGTCGGACATCTTCAGCTTTGGTGTGGTTCTTCTTGAGATTATCAGTGGTCGTCAACCTATCTATAAATCTAAAGGCAAAGAAGAAAGCCTTGTCATATGGGCTGCTCCTCTCTTACAAGATAAAAGACGCATAATAACGGAGTTAGCTGACCCACAATTGAAAGGAAACTTCCCGGAAAAGGAGATGCAGATAATGGCATATTTAGCAAAAGAGTGTTTGCTGTTGGATCCTGACACTCGACCAACCATGAGTGAAGTCGTTCAGATTCTTTCAACTATATCGCCAGACAAATCTAAAAGGACAAGAAACATTCCATTGAACCTTTTCCAGGAACCAAGGAATTCGGAGAAGCTAAAGCAAGTTCCATCTAGCAGAGTAGATATTGACCATAATCTTTGGGATGGAAACTTCAATAATGAAGCAGATATAGTTTCTGGTAAGTGTATGGATAGTTTGGTCCTCGTGACTTCAAAAGCTGAGAGCTGGTATGGATCAGAGGAAGAAATTGTCGACCTAACTGAGCCTCGGTATGAAGCATTTTGCATGACAAACGTTAGTTCAGCCTCATAA 1845 0.4049 MALFSFFIVYGLEKMKLQFKIALAFVISLLWIQSSFCGGPSGSLNKWICRCSFQGNQSSSLANCSTSCDCRLDAKESESLWTCLCDPNSFPNVEADGHSSNCFTACNCTWGVLIISQGSKKHISSKIVIIILLLCVICTTVAFLASIICYAYRRNKCPIQSPIFSSDNETSYNSTAILISNRTSVPETKATTNSAINLIPGCFQMSSFLCGSKGETFHGNIIQFSFAVLENATEKFSASNLIGLGRSSYVYRGRLKSGINVAVKRLKAQGGAEANSEFLTEIELLSRLHHCHLVPLLGYCLESKGRYVERLLVLKYMANGNLRDCLDGVSGKCPDWATRVTVAMGAAWGLEYLHEAAAPRIMHRDIKSTNILLDENYQAKITDLGMAKNLRTDDFPSCSNSPARMQGTFGYFAPEYAIVGRASLKSDIFSFGVVLLEIISGRQPIYKSKGKEESLVIWAAPLLQDKRRIITELADPQLKGNFPEKEMQIMAYLAKECLLLDPDTRPTMSEVVQILSTISPDKSKRTRNIPLNLFQEPRNSEKLKQVPSSRVDIDHNLWDGNFNNEADIVSGKCMDSLVLVTSKAESWYGSEEEIVDLTEPRYEAFCMTNVSSAS 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03443 614 SMART serkin_6 236 518 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g03443 614 Gene3D Transferase(Phosphotransferase) domain 1 317 535 - -
Accr1g03443 614 Gene3D Phosphorylase Kinase; domain 1 211 316 - -
Accr1g03443 614 ProSitePatterns Serine/Threonine protein kinases active-site signature. 361 373 IPR008271 GO:0004672|GO:0006468
Accr1g03443 614 FunFam receptor-like serine/threonine-protein kinase NCRK 317 527 - -
Accr1g03443 614 ProSiteProfiles Protein kinase domain profile. 236 518 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g03443 614 Pfam Protein tyrosine and serine/threonine kinase 239 515 IPR001245 GO:0004672|GO:0006468
Accr1g03443 614 FunFam receptor-like serine/threonine-protein kinase NCRK 210 316 - -
Accr1g03443 614 CDD STKc_IRAK 242 515 - -
Accr1g03443 614 PANTHER OS01G0750732 PROTEIN 82 528 - -
Accr1g03443 614 SUPERFAMILY Protein kinase-like (PK-like) 217 515 IPR011009 -
Accr1g03443 614 ProSitePatterns Protein kinases ATP-binding region signature. 242 264 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03443 Accr-Chr1 71009835 71013497 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03443 15 610 Receptor kinase-like Gene Family AT2G28250 53.400 0.0 579
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XVI Accr1g03443 PK_Tyr_Ser-Thr 1.4e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03443 - - gmx:100817870 848.195