Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03441 ATGAGCAGTCTAAGGCCAGAATCGCATGTAGCACAACAGATTCGGCGCGACAAGTTGAGAATCCAAAATAGTTCCCAGCATTTACAAGATTTCCCCACTAACATTGAACAATTGTCACTACAACACCCAGGCTTAAACTCAGATTTTCTGCAAGTTAGGAGTGTCACAAATTCAAACATGCTTTATGAGCCTGCCTTTTATTCATCAGAAATTGCAAGTTTTTCTACACCTTCTGATACTTTGTTTCCTGACGGCGAAGAAGTCAAACCAAGTAGACTAATGTTGCCTCACTATGCATCATTCTACCATTCATCTGTATCGGAACCGCCACCGTCGTCGTCAGCCGGCGACCAACCCCGAGATAACTTGGGTTATGATTGGATGATTAATTATGGAAGTAGTTCCGGTGTTAATGAAACCAACTATCCCAACTCTAATGTTGCCACTGAGCTGAATGATAACAATTTGTACGTTTATCAGCACCTGGCGAAGCCTAGTTACCACGAACTCATCGGAAGGCAGTTAGGCGAAATGCATAATCATTTTTCTTCCCCACCCCCATTTTTTCAGAATACTTTGCCCGATATCGTTAAGTATGCTTCTATCAGCGCCCAAGGATCTGATCACTTGGTTTCGCAGATGCAAAATCCTGGCCATGGGATCTGGATGGGCAATCAAAATCAATCAAATCCTCAGGGATTATCTCTTTCACTTTCGTCGAATTCCCATTCCAAGGCTTCTCTTTCTGGGTTCCCATGTAATGATGGTCACGGATCACATGACCCTTACTCACGATGTGATAAATCTGCAAAATCTGTTATTAAAGATTGTGGAAAATCACTCCAAGACGTCGTGGGAGTAGGTTCGAGCACTAGCGGTTATAGAAGTAATGTGGGTCCGCTTGGGCCTTTCACTGGATATGCAACCATTTTAAAGAGCTCCAGATTCTTGAAGCCAGCTCAGGAGTTGTTTGATGAATTCTGTAGTGTGTGTGGATCTAATGGTTCAGATTTCTCGAGGGTGTCTGGAGAAGCCAGTGCTACTAATTCTGTAGCTGAAGTTGTCGTTAATAATGCAACTGGAAGTGGGGTTAGTGCAAAAATGAGTGTTAGTAATAATGCAGGTGCTGCTTCGTGTTCTATTTTGTATAATTCCAAGGAAAATAGTGGTGATTGTGAGTCAAGAGGAAACTTTGATTGTTCTTCTCGATCGGTGCATCAACAAAAGAAGGCAAAGCTGCTGTACATGCAAGAGGAGGTTACGAGAAAACACAAGCAATATCACCAACAAATGCAAATGGTTGTTTCCTCTTTTGAGTCAGTGGCAGGTCTTAGTTCGGCTACCCCTTATATCAGTATGGCTCTCAAGTCAGTAGCAAGACACTTCAGGATCCTGAAAAATGCTATCTTGGATCAGGTCAAGCATTTAAAAGAGGTGTTGGGGGAGGATTTCTCAGGATCCACGTCTGTTGCAATTACTAAACTTGACACTGGTGGGCTAGCTTATCTGGACCAAAGCTTCCCGAAGAACAAAGCTGCATTTCTCGAACCCCAACAAGTATGGAGGCCCCAGAGAGGCTTGCCAGAACGCGCAGTCGCAATTCTTAAAGCTTGGTTATTTGAGCATTTCCTTCACCCGTACCCCACGGATACTGATAAACACATGCTGGCTACACAAACAGGTCTATCTCGAAACCAGGTATCGAACTGGTTCATAAATGCTCGAGTCCGTGTGTGGAAGCCGATGGTTGAGGAAATACACAATCTTGAAACAAAAGGCGTGGTGGGTTGGAACCAGAACGAGGGAACAACATCTGGTGCTGAAGGAAGCGGTCAACAAGCTATGGTTGAAGCAACTCCTCTGGGCAAGTTTGGTAAGCACGGGGATGTAATAATACCGGAGAGGCAATTCCAGAGTTTGGGAATGAGTTCTTCCTCAGGTGGAGGGAATTCGGAGGGAGTGGGATATCCTATGGGTTCATCAGAGGAATGGAATCAAGAGAAGAGGTCTAAATTGGAATGTCATCAGATAACGCCAAACGTGGATGGAACGTTAATGGGTTTTGTACCCTACAGGCGTGGTGGAGGCCTCGATGTGGGGGGACTTGGGTCGGTGTCACTAACGTTGGGTCTTAGACATGGGGTTGAAGGCGCACAACACCACCAGCAACAACAGTTGCACCAGGAAGACCAGATTAGACGTCAATTTGGTGAGCATATGATCCATGACTTTGTGGGTTAA 2241 0.4485 MSSLRPESHVAQQIRRDKLRIQNSSQHLQDFPTNIEQLSLQHPGLNSDFLQVRSVTNSNMLYEPAFYSSEIASFSTPSDTLFPDGEEVKPSRLMLPHYASFYHSSVSEPPPSSSAGDQPRDNLGYDWMINYGSSSGVNETNYPNSNVATELNDNNLYVYQHLAKPSYHELIGRQLGEMHNHFSSPPPFFQNTLPDIVKYASISAQGSDHLVSQMQNPGHGIWMGNQNQSNPQGLSLSLSSNSHSKASLSGFPCNDGHGSHDPYSRCDKSAKSVIKDCGKSLQDVVGVGSSTSGYRSNVGPLGPFTGYATILKSSRFLKPAQELFDEFCSVCGSNGSDFSRVSGEASATNSVAEVVVNNATGSGVSAKMSVSNNAGAASCSILYNSKENSGDCESRGNFDCSSRSVHQQKKAKLLYMQEEVTRKHKQYHQQMQMVVSSFESVAGLSSATPYISMALKSVARHFRILKNAILDQVKHLKEVLGEDFSGSTSVAITKLDTGGLAYLDQSFPKNKAAFLEPQQVWRPQRGLPERAVAILKAWLFEHFLHPYPTDTDKHMLATQTGLSRNQVSNWFINARVRVWKPMVEEIHNLETKGVVGWNQNEGTTSGAEGSGQQAMVEATPLGKFGKHGDVIIPERQFQSLGMSSSSGGGNSEGVGYPMGSSEEWNQEKRSKLECHQITPNVDGTLMGFVPYRRGGGLDVGGLGSVSLTLGLRHGVEGAQHHQQQQLHQEDQIRRQFGEHMIHDFVG 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03441 746 CDD homeodomain 521 582 IPR001356 GO:0003677
Accr1g03441 746 SMART HOX_1 521 585 IPR001356 GO:0003677
Accr1g03441 746 Gene3D - 524 586 - -
Accr1g03441 746 SMART prehox3 305 471 IPR006563 -
Accr1g03441 746 Pfam Associated with HOX 310 469 IPR006563 -
Accr1g03441 746 SUPERFAMILY Homeodomain-like 523 588 IPR009057 -
Accr1g03441 746 MobiDBLite consensus disorder prediction 213 241 - -
Accr1g03441 746 Pfam Homeobox KN domain 538 577 IPR008422 GO:0003677|GO:0006355
Accr1g03441 746 ProSiteProfiles 'Homeobox' domain profile. 518 581 IPR001356 GO:0003677
Accr1g03441 746 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 220 603 - -
Accr1g03441 746 FunFam BEL1-like homeodomain protein 9 524 586 - -
Accr1g03441 746 MobiDBLite consensus disorder prediction 640 667 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03441 Accr-Chr1 70981651 70986757 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03441 401 590 Homeobox Transcription Factor Family AT4G34610 56.842 1.29e-65 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Accr1g03441 POX 5.5e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03441 - - vum:124831694 625.935