Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03428 ATGGCCAAACTCACAAGTAGCAGAGGGAAAAAGAAAGGAGGGATCGTGAAGCTGAAGGTTGTGGTTGAGAAGATCCAGAAGAAGCTGTTGCCGGGTATGAAATGGAGTTCATATAGAGAGGTGTGCGAAGAAGAAGAAGGGAGTGAGTCGAGCTATGTCCCGGAAGACGTGAAAGAAGGACATTTTGCAGTGATTGCAGAGGAGGAAGGAGAAGAGCCAAGGAGATTTGTGGTGCCACTAAGCTGTTTAACGCAGCCAACATTTTTGAGGCTGTTGGAGGAAGCAGCGGAAGAGTACGGGTTTGATCAAGAAGGTGCACTAACTATTCCATGCAGTCCGAGAGAGCTTGAGAGGATATTGGAGGGACACTCTGAAAGTGATGATGCACTTAGCTGGAATAATACCTGTAAACACATGGTTCAAACCTACTGA 432 0.4676 MAKLTSSRGKKKGGIVKLKVVVEKIQKKLLPGMKWSSYREVCEEEEGSESSYVPEDVKEGHFAVIAEEEGEEPRRFVVPLSCLTQPTFLRLLEEAAEEYGFDQEGALTIPCSPRELERILEGHSESDDALSWNNTCKHMVQTY 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03428 143 Pfam Auxin responsive protein 48 121 IPR003676 GO:0009733
Accr1g03428 143 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 39 119 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03428 Accr-Chr1 70862561 70862992 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03428 13 111 Calmodulin-binding Proteins AT5G20810 41.414 6.13e-16 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03428 K14488 - qsu:112024380 148.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g03428 1 70862561 70862992 Accr1g03428 1 70862561 70862992 ECH