Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03393 ATGGCTTTCACATGGTCCCGCCTGCTTCTTTCTCGCTCTTCACCCTCCAACTACTCCATCTTCTCCGATCTCACCCTAGCTCCCACATCTTCTGATTTACTCCACCGAAGCAGCATCTCCGTTGAGCCTCCATTTCCTCTCACAGTCAAGCTTTTCAGGCCCAGACTCCAAGTCCATTGCTCTGCCAAACCCGAGGGAGAGGAGCAGCGGACTTCGGCAGAAACTGCTTTATCTTCTTCCAGTGAAGCCAGACATGACGAGACAAATGAGGCTCAGAGATCGGTCGCCACCTCGTCAGGCGATTCTTTCTTTCTTGGAATTCGAGAGCCAGTTTATGAGGTTTTGGAGGTGAAGTCTAATGGAACGGTCTCAACTAGAACAATCAACAGAAGACAGATACTGAAATCAAGTGGTCTTCGTCCACGAGATGTTCGAAGTGTGGATCCATCACTATTTTTGACAAATTCAATGCCTTCTTTGCTGGTCCGTGAGCATGCTATTCTTCTAAATTTGGGTTCATTACGAGCAATAGCCATGCAAGAGCGTGTACTTATATTTACGTATAACTGTAAAGGAGGGAAAGCTTTTTTAGAGGCATTACTGCCTCGGTTAAACCCTAAGAACAACAACGGAGGACCATCCATGCCATTTGAGCTTGAGGTTGTTGAAGCAGCCCTGCATTCAAGAATACAGCATTTAGAGCAGAAACTGATGCACTTAGAACCTCGTGTTCAAGCTCTTCTTGAGGTTTTACCGAACCGACTAACTGGCAACATATTGGAGGAACTCCGTATCAGCAAACAAACTCTGGTTGAGTTAGGTTCAAGGGCTGGAGCTCTCACACAGATGCTGCTTGACCTTTTGGAGGACCCCCTTGAAATACAACGAATATGTATTATGGGAAGAAACTGCACGCCTAAGAAAGGACAAGACAATGTAGAATGCTCAGTAGCCTCCGAAAAGCAGATTGCTGAGGAGGAGGAGGAGGAAATTGAGATGCTTTTGGAAAATTACCTTCAAAGATGTGAATCTTGCCATGGCCAAGCTGAAAGGCTTCTAGATTCCGCAAGAGAAATGGAAGATTCTATATCTGTCAGTTTAAGCTCAAGGAGGCTTGAGGTTAGCAGAGTAGAACTGCTTCTCCAGGTTGGAGCATTCTGTTTGGCAGTTGGAGCCCTTATAACAGGTATTTTTGGCATGAATCTGAAGTCCTATCTTGAAGAACGTATGTTTGCATTTTGGCTGACGACAGCTGGGATAATAGTAGGTGCAGTTGTGGCCTTCTTTCTTATGTATTCCTATCTCAAGGCAAGGAAAGTATTTTGA 1326 0.4525 MAFTWSRLLLSRSSPSNYSIFSDLTLAPTSSDLLHRSSISVEPPFPLTVKLFRPRLQVHCSAKPEGEEQRTSAETALSSSSEARHDETNEAQRSVATSSGDSFFLGIREPVYEVLEVKSNGTVSTRTINRRQILKSSGLRPRDVRSVDPSLFLTNSMPSLLVREHAILLNLGSLRAIAMQERVLIFTYNCKGGKAFLEALLPRLNPKNNNGGPSMPFELEVVEAALHSRIQHLEQKLMHLEPRVQALLEVLPNRLTGNILEELRISKQTLVELGSRAGALTQMLLDLLEDPLEIQRICIMGRNCTPKKGQDNVECSVASEKQIAEEEEEEIEMLLENYLQRCESCHGQAERLLDSAREMEDSISVSLSSRRLEVSRVELLLQVGAFCLAVGALITGIFGMNLKSYLEERMFAFWLTTAGIIVGAVVAFFLMYSYLKARKVF 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03393 441 FunFam Magnesium transporter MRS2-11, chloroplastic 190 372 - -
Accr1g03393 441 Gene3D Magnesium transport protein CorA, transmembrane region 189 372 - -
Accr1g03393 441 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 377 432 IPR045863 -
Accr1g03393 441 Pfam CorA-like Mg2+ transporter protein 203 430 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Accr1g03393 441 CDD Mrs2_Mfm1p-like 114 440 IPR039204 -
Accr1g03393 441 MobiDBLite consensus disorder prediction 61 95 - -
Accr1g03393 441 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 84 440 IPR039204 -
Accr1g03393 441 Gene3D - 108 188 - -
Accr1g03393 441 Coils Coil 317 341 - -
Accr1g03393 441 FunFam Magnesium transporter MRS2-11, chloroplastic 107 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03393 Accr-Chr1 70425359 70430330 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03393 105 441 MRS2 Gene Family AT5G22830 81.009 0.0 537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03393 K16075 - qsa:O6P43_000409 575.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g03393 1 70425359 70430330 Accr1g03393 1 70425359 70430330 ECH