Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03383 ATGGAGTTCTGGGGTGTTGAGGTTAAGGCTGGGGAGCCTGTTAAAGTTGATCCTCTAGATTTTGATGCCTACATTCATATTTCTCAGGCTGCCCTGGGTGAGACAAAGAAAGATAAGGGAGCTGAACCTGTGGTTCTTTACTTGAAATTTGGTGACCAGAAGCTTGTTTTGGGAACCCTTTCAAAGGATAATTTCCCCCAGATATCTTTTGACTTAGTTTTGGAAAAGGAGTTTGAGCTCTCCCACAATTCAAAAAATGTCAGCGTCTTTTTCTGTGGATATAAAGCGGAAATCCCTGAAGAAGAGGGTGATGATGACTTTGACGACATGTCTGATAGTGAAGAGGATGTAGATCTCCCAGTGATAGCAAAAGATAATGGAAAACTTGATACCAAGACTGGCCTAGCTAAGGTTGCCCCATCCAAAAAAAGTGACGCCACTTTTAATGATACCAAAAAGCAAGCCAAGGTTGAACCAAAGGATGAAGAAGATGATGAAGATGACGACTCTGATGAAGAAGATGATGAAGAAGGTGGCTCTGATGAGGATGTGATGGATGCTGATAGTGATAGTGATGAGGAGAGTGATGAGGATGAAGATGACGAGGAGACTCCCAAGAAGCAGACTCCCAAGAAGGCGGATCTGAGCAAGAAGAGACCCAATGACTCTGCATCAAAAACTCCAGTTTCTGCCAAGAAAGCTAAATCCGGTACTCCTGAAAAGAATGATGCTAAGAAAGGTGGTCATACCTCAACTCCTCACCCAATGAAGAAGGGGGCAAAGACTCCTAACAGCGAAGCCAAGGAGCCCAAGTCTGGTGGACAATTGTCCTGCAAATCTTGCAGCAAGTCATTCAACTCTGAAAGTGGTTTTCAACAACATAACAAGGCAAAGCATGGTGGTCAGTGA 909 0.4389 MEFWGVEVKAGEPVKVDPLDFDAYIHISQAALGETKKDKGAEPVVLYLKFGDQKLVLGTLSKDNFPQISFDLVLEKEFELSHNSKNVSVFFCGYKAEIPEEEGDDDFDDMSDSEEDVDLPVIAKDNGKLDTKTGLAKVAPSKKSDATFNDTKKQAKVEPKDEEDDEDDDSDEEDDEEGGSDEDVMDADSDSDEESDEDEDDEETPKKQTPKKADLSKKRPNDSASKTPVSAKKAKSGTPEKNDAKKGGHTSTPHPMKKGAKTPNSEAKEPKSGGQLSCKSCSKSFNSESGFQQHNKAKHGGQ 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03383 302 MobiDBLite consensus disorder prediction 146 160 - -
Accr1g03383 302 Gene3D Nucleoplasmin core domain 1 100 - -
Accr1g03383 302 MobiDBLite consensus disorder prediction 236 250 - -
Accr1g03383 302 FunFam Histone deacetylase HDT1 1 100 - -
Accr1g03383 302 ProSiteProfiles Zinc finger C2H2 type domain profile. 276 302 IPR013087 -
Accr1g03383 302 MobiDBLite consensus disorder prediction 204 221 - -
Accr1g03383 302 ProSitePatterns Zinc finger C2H2 type domain signature. 278 299 IPR013087 -
Accr1g03383 302 Pfam Nucleoplasmin-like domain 3 94 IPR041232 -
Accr1g03383 302 MobiDBLite consensus disorder prediction 268 296 - -
Accr1g03383 302 MobiDBLite consensus disorder prediction 134 302 - -
Accr1g03383 302 MobiDBLite consensus disorder prediction 161 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03383 Accr-Chr1 70312734 70315240 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03383 1 109 C2H2 Transcription Factor Family AT5G03740 53.211 3.12e-33 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Accr1g03383 NPL 1.3e-12 CL0055
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03383 - - gmx:100795506 324.709