Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03377 ATGGACGACTCTGAGGCGCTCGGAAATTCCAATCCTTCCGATAGAGCAAAAGCGAAGAAGCAGAAGGTGGTGGTGATAATGGGTCCCACTGGCTCTGGGAAGTCCAAGCTCGCCATTGATCTGGCTTCCCACTTCCCGGTCGAAGCTATCAACGCTGATTCCATGCAGGTTTACCGAGGCCTGGATGTTCTCACCAACAAAGTTCCACTCTCCGACCAAAAGAGGGTGCCTCACCATCTCCTGGGTACCGTAAGTCCAAACGTGGAGTTCACAGCTAAAGAATTTCGAGATTCTGCTATCCCTCTCATCAATGAAATATCTGCTCGTAACTGCTTGCCTGTCATAGTTGGGGGTACAAATTATTTCATCCAGGCTCTCGTGAGTCCATTCCTTCTAGATGAATCATTTGAAGCTATGGACGAAACCTGTATGGACAACCTGTCTGGTACTACACCGTTGGATAAGAGTTTCATCCCTGAAAAGAACAGTTCAAACAATAATTATGATTTGCTTAAAGATATTGATCCCGTTGCCGCAAATAGAATGCATCCAAATAACAATAGAAAGATCAGTCAATACCTTAGTTTGTATGCTCGCACTGGTGTTCTTCCGAGCAAAATTTTCCAAGGAAAAGCAGCGGAGAAATGGGGTCAAGTTGGTAACTCCAGATATGATTGCTGTTTTGTATGCGTGGATGCATCTCTCCCCGTACTGGACAGATATGTAGAACAGAGGGTAGATTGCATGATGGATGCTGGATTACTTAATGAAGTCTATGACATTTACGATCAAAATGCTGATTATAGTCGAGGCTTGCGGCAGGCCATTGGTGTCCGTGAATTTGAACCTCTTCTGAAAACCCCTGTAATTGAAGAAATCTGCAAAAGAGAGAGAGAATTGACGAAGGATTCCAGGCGTGAAAAGGGTGATAAAGTGTCTAATTACGATCTGAGGGAGCTATTGAAGTTGTCTTCTGACATGAAATCCATTACACTTATGGAAGAAGCAATTGAAAAAGTAAAGGTTAACACACGAAGACTAGTCCGCCGTCAGAAGAGGATGGTTAATCGACTGCAAAAATTGTTTGATTGGACCATACACTACGTGGATTCCACGGATTCATTATCAAGTAAATCAGATGATATATGGACTGGCCAAGTGGTGGATCCTGCGGTGAAGATCGTTAGATCTTTTCTTGGTAATAATGAGAGCTTGTCATCCACTTCTGTGACATCAAATAGCAGTGGGGTTAAGATACTTCAAAGGGACCTCTGGACCCAATACACATGCAAGGCATGTGGAGATAGGGTGCTTAGAGGAATACATGAATGGGAACAACACAAACAGGGTCGTGGACACCGGAAACGTATTGCTAGTCTCAAGAACAAATCACAAGCTCTCTGTTTGGTGGAACAATAG 1419 0.4383 MDDSEALGNSNPSDRAKAKKQKVVVIMGPTGSGKSKLAIDLASHFPVEAINADSMQVYRGLDVLTNKVPLSDQKRVPHHLLGTVSPNVEFTAKEFRDSAIPLINEISARNCLPVIVGGTNYFIQALVSPFLLDESFEAMDETCMDNLSGTTPLDKSFIPEKNSSNNNYDLLKDIDPVAANRMHPNNNRKISQYLSLYARTGVLPSKIFQGKAAEKWGQVGNSRYDCCFVCVDASLPVLDRYVEQRVDCMMDAGLLNEVYDIYDQNADYSRGLRQAIGVREFEPLLKTPVIEEICKRERELTKDSRREKGDKVSNYDLRELLKLSSDMKSITLMEEAIEKVKVNTRRLVRRQKRMVNRLQKLFDWTIHYVDSTDSLSSKSDDIWTGQVVDPAVKIVRSFLGNNESLSSTSVTSNSSGVKILQRDLWTQYTCKACGDRVLRGIHEWEQHKQGRGHRKRIASLKNKSQALCLVEQ 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03377 472 Gene3D Classic Zinc Finger 424 467 - -
Accr1g03377 472 NCBIfam tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 23 288 IPR018022 GO:0008033
Accr1g03377 472 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 24 130 IPR027417 -
Accr1g03377 472 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 20 399 IPR039657 -
Accr1g03377 472 MobiDBLite consensus disorder prediction 1 20 - -
Accr1g03377 472 Gene3D - 155 211 - -
Accr1g03377 472 Pfam IPP transferase 56 353 - -
Accr1g03377 472 FunFam tRNA dimethylallyltransferase 423 466 - -
Accr1g03377 472 Hamap tRNA dimethylallyltransferase [miaA]. 23 376 IPR018022 GO:0008033
Accr1g03377 472 Gene3D - 20 423 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03377 Accr-Chr1 70203091 70206483 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03377 26 462 C2H2 Transcription Factor Family AT2G27760 57.823 1.26e-176 501
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03377 K00791 - gmx:100792690 662.914