Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03374 ATGGAGACATGGCTCGAGGATCTAGCCGACGACCTGCAGAGCTTAAGCTTCTCCACCACCACCGCCACTGATAACAAACGGAGCACAAGCTCTGGCTCCGAATCAACAACCTTAACTGACTCAACCTCTGCCCGCTTGGCCTCACTCCCATTCGCAACGTTTACGAAACCCCACGCGCCATCATCTGACCCTTGTTGGGCTGCCATCCACCGGATCCGATCAGAGTCCCCGAGTCACCGCATAGCCCCTTCGGACCTTCGGTTCAGCCACAGGCTCGGCTCCGGCGACATAGGCTCCGTCTACCTCGCGGAGCTCAAATACAGCAGCAATGGCGAGGAAGGCTGCGTGCTCTTCGCTGCTAAAGTGATGGACAAGAAAGAGCTCGCGAGTCGGAGTAAAGAAGGGAGGGCGAGGACCGAGAGGGAAATTCTCGAATTGTTGGACCACCCGTTTCTTCCCACTCTCTACGAGGCCATAGACGCGCCCAGATGGATCTGCCTGTTAACCGAGTTCTGCCCCGGCGGTGATTTGCACGTGCTCCGACAACGACAGCCCAACAAGCGCTTCCATGAATCCGCCGTCAGGTTTTATGCGTCAGAGGTAGTGGTGGCTTTAGAATACCTTCATATGCTGGGGATAGTGTACCGTGATCTCAAACCCGAGAACGTGTTAGTTCGATCTGATGGCCATATCATGCTCACCGACTTTGACCTATCGTTAAAAGGCGATGATTCCACATCAACGGCTCAGATCGTTTCTGAACAAAACCCGGCTCCCTCGGTCCCACAGAATAAGGATTACCACGTTGATCCCCCTCCTTTTGCCTCCTCTTCCTGCATACTTCCCAACTGTATAGTTCCCGCTGTGTCGTGCTTTCACACAAAACGCAAGCGCAAGAAGAAGCAAAGCCTGCGTGATGGGCCTGAGTTTGTGGCCGAGCCCATTGACGTACGGTCCATGTCATTCGTTGGGACCCACGAGTACCTGGCGCCGGAGATAGTGTCCGGCGAGGGACACGGCAGCGCGGTGGACTGGTGGACGTTGGGTATATTTACATTTGAACTGTTTTACGGAGTGACGCCGTTTAGGGGATTGGACAATGAGCTAACCCTAGCTAACATCGTGGCTCGAGCCCTCGAGTTCCCAAAAGAACCAACCGTGCCGGCTACGGCGAAGGATCTTATCTCGCAGTTATTGGTGAAGGAACCGACGAGGCGGTTGGGGTCAAAGATGGGTTCGTCGGCGATAAAACACCACCCCTTTTTTAAAGGCGTGAACTGGGCATTGTTGAGGTGTACCCCTCCACCCTTTGTGCCCCCACCTTATAAAGAAACTGTATCTGATGAAAGTTGTCCCCCGACTCCTATTGATTACTACTGA 1380 0.5406 METWLEDLADDLQSLSFSTTTATDNKRSTSSGSESTTLTDSTSARLASLPFATFTKPHAPSSDPCWAAIHRIRSESPSHRIAPSDLRFSHRLGSGDIGSVYLAELKYSSNGEEGCVLFAAKVMDKKELASRSKEGRARTEREILELLDHPFLPTLYEAIDAPRWICLLTEFCPGGDLHVLRQRQPNKRFHESAVRFYASEVVVALEYLHMLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKGDDSTSTAQIVSEQNPAPSVPQNKDYHVDPPPFASSSCILPNCIVPAVSCFHTKRKRKKKQSLRDGPEFVAEPIDVRSMSFVGTHEYLAPEIVSGEGHGSAVDWWTLGIFTFELFYGVTPFRGLDNELTLANIVARALEFPKEPTVPATAKDLISQLLVKEPTRRLGSKMGSSAIKHHPFFKGVNWALLRCTPPPFVPPPYKETVSDESCPPTPIDYY 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03374 459 Gene3D Transferase(Phosphotransferase) domain 1 318 440 - -
Accr1g03374 459 FunFam serine/threonine-protein kinase D6PK-like 176 243 - -
Accr1g03374 459 Gene3D Phosphorylase Kinase; domain 1 85 175 - -
Accr1g03374 459 SUPERFAMILY Protein kinase-like (PK-like) 66 451 IPR011009 -
Accr1g03374 459 SMART serkin_6 86 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g03374 459 Pfam Protein kinase domain 89 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g03374 459 Pfam Protein kinase domain 319 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g03374 459 FunFam serine/threonine-protein kinase D6PKL2 85 175 - -
Accr1g03374 459 ProSiteProfiles Protein kinase domain profile. 86 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g03374 459 Gene3D Transferase(Phosphotransferase) domain 1 176 267 - -
Accr1g03374 459 FunFam serine/threonine-protein kinase D6PK-like 317 440 - -
Accr1g03374 459 MobiDBLite consensus disorder prediction 20 41 - -
Accr1g03374 459 PANTHER FLIPPASE KINASE 1-RELATED 21 443 - -
Accr1g03374 459 ProSitePatterns Serine/Threonine protein kinases active-site signature. 213 225 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03374 Accr-Chr1 70172454 70177574 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03374 1 459 AGC Kinase Gene Family AT3G44610 65.171 0.0 574
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Accr1g03374 Pkinase 8.6e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03374 K08286 - cave:132163612 729.939