Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03372 ATGAACGGTGAAAACCGAAGATGGGACCGCAAAGACTCCCATAGAGCCAAGAAGCAGAAGCTAATCCGCAACGCTGAAGAAGAACTCGAGGCTAAATTAGGGTTCGATCTTTTCTCAGAGGGCGAAAAACGACTTGGATGGTTGCTAAATTTTTCATCTTCATCTTGGGAGGATGAAGATACACACAAAGTCTATAGTTGTGTGGATCTTTATTTTGTTTCTCAGGATGGTTCTATGTTCAAGTCAAAGTACATATTTCAGCCTTATTTCTATGTGGCTACAAAGGATAAAATGGAGATGGAAGTTGAAGCATATTTGAGACGGCGTTATGAAAATCAAATTACAGATATTGAAATTAAAGAGAAGGAAGACCTTGATCTTAAAAATCATTTGTCTGGATTACAAAAATCTTATTTAAAGCTATCCTTTGACACTGTGCAACAATTGATGAATGTGAAGAGTGACCTGATGCACGTTGTTGAAAGAAATCAGGCAAAATCTGATGCAGCAGAAGCTTATGAATCCATATTAACTGGAAGAAGGGAGCAAAAATTTCAAGATTTTCTAGATTATATTATTGATCTTCGTGAATATGATGTTCCTTATCATGTTCGCTTTGCCATTGATAATGATATTCGATCTGGCCAATGGTATGATGTTAGTGTGTCCAATACTGGGGTTACACTCGAGAAGAGGACTGATCTTCTGCAGCGTGCTGAAGTCCGTATTTGTGCTTTTGATATAGAGACCACAAAACTTCCATTGAAGTTCCCTGATGCTGACTATGACTTAATTATGATGATTTCATACATGGTAGATGGACAAGGGTATTTGATCATAAATAGAGAGTGTGTTGGGGACGACATAGAGGATTTGGAGTATACTCCAAAACCGGAGTTTGAAGGATATTTTAAGGTGACGAATGTTCAAAATGAGGTGGAACTTCTTAGATTGTGGTTTTCTCATATGCAAGAGGTGAAACCAAGTATATATGTTACATATAACGGTGATTTCTTTGATTGGCCATTTGTGGAAAGAAGGGCTACTCATCATGGGTTCAAAATGCGTGATGAGTTGGGTTTTCAATGTGACAATAACCAAGGGGAATGTCGAGCTAAATTTGCTTGCCATCTAGATTGTTTTGCTTGGGTTAAACGTGATAGTTATCTTCCTCAGGGGAGTCAAGGCCTGAAGGCTGTTACAAAAGCAAAGTTGGGTTATGATCCCCTAGAGGTGAACCCTGAGGACATGGTTCGCTTTGCTAAGGAAAAACCTCAGATGATGGCCTCTTATTCCGTTTCTGATGCTGTGGCAACTTATTACTTGTATACAACCTATGTCCATCCCTTTATTTTTTCTCTTGCAACAATTATACCCATGTCACCAGATGAGGTTTTGCGTAAAGGTAGTGGGACCCTCTGTGAAATGTTGCTCATGGTTCAGGCATACAAGGCTAATGTGATCTGCCCCAACAAACACCTGTCTGATCCTGAGAAATTTTACAACAATCACCTTCTTGAGAGCGAGACATACATAGGTGGCCATGTGGAATGCCTTGAAAGTGGTGTTTTTAGATCTGATCTTCCAACTAGTTTTACCCTTGAACCTTCAGCATACGAGCAATTGATCAACAACCTTGATCGAGACCTGCAATATGCTATAAGAGTAGAGGGTAAGGTGGACTTGGATTCCATCTCTAACTATGATGACGTTAAGAATGCTATCATGGAAAAGCTTATAAAATTGCGAGACAAGCCAATATGTGAAGAATGCCCCCTCATTTATCATTTGGATGTAGCTGCTATGTATCCAAACATAATCTTAACAAACCGGCTTCAGCCGCCTTCAATAGTTACAGAGGAGGTCTGCACTGCATGTGATTTCAACCGTCCTGGAAAGACTTGCCTTCGAAAACTTGAGTGGGTTTGGCGTGGAGAACTTTTCATGGCAAAGAAAAGTGATTATTATCATTTAAAGAGGCAGATTGAGTCAGAGTTTGTTGAAAGTACTGATAGGCAGTCATCTAAATCATTTCTTGACCTGCCGAAGTCAGAGCAGCAATCCAGGCTAAAAGAACGTCTAAAGAAATACTGCCAGAAGGCATACAAACGGGTACTTGATAAACCAGTAACTGACATTCGTGAAGCAGGGATCTGCATGCGTGAAAATCCATTTTATGTTGACACTGTTCGCAGTTTTCGTGATAGAAGATATGAATACAAAGGTCTTAATAAGGTTTGGAAGGGAAAGTTGTCAGAAGCCAAGGCCAGTGGAAATTCCATTAAGATCCAAGAAGCACAAGACATGGTTGTGCTTTATGATTCATTGCAACTTGCGCACAAGTGCATACTTAATTCCTTTTATGGATATGTCATGCGCAAGGGGGCAAGATGGTACTCCATGGAAATGGCCGGAGTTGTTACATATACTGGTGCAAAAATAATTCAGAATGCCCGCTTGCTTGTTGAGAAAATAGGAAAGCCACTTGAATTAGACACGGATGGTATTTGGTGTGCACTTCCTGGATCTTTTCCAGAAAATTTCACTTTTAAAACAAAAGACTTAAAGAGGAAATTGACTATTTCATACCCTTGTGTCATGCTTAATGTTGATGTGGCAAGGAACAATACAAATGATCAGTATCAGACTCTCACTGATACAGTTAGGAAAACTTACGCAACGCACAGCGAATGCTCTATTGAATTTGAAGTTGATGGACCATACAAGGCAATGATCCTTCCAGCTTCCAAGGAAGAAGGAATTCTAATTAAGAAGCGGTATGCTGTTTTTAATGATGATGGAACACTTGCAGAGCTCAAAGGTTTTGAGATCAAGCGGAGAGGTGAACTAAAGCTAATAAAAGTTTTCCAGGCAGAGCTTTTTGACAAGTTTCTCCATGGGTCAACCATAGAGCAATGTTATTCAGCTGTCGCTACTGTGGCAAACCGCTGGCTTGATCTTCTTGATAACCAAGGAAGGGATATTGCAGATAGCGAGTTGCTTGATTATATATCAGAATCAAGTACCATGAGCAAGTCTTTAGCTGATTATGGTGAGCAGAAGTCTTGTGCTGTTACCACGGCTAGACGGCTTGCTGACTTTCTTGGTGATGCAATGGTCAAAGATAAAGGTCTACGCTGTCAGTACATAGTCGCATGTGAACCTAAGGGAACACCTGTAAGCGCCCGTGCTGTTCCTGTGGCAATATTTGAAACTGATGCTGAAGTAATGAAGTTCTATGTCCGAAAATGGTGCAAGGTCTCAGCTGATGTTGGGATTCGATCCATAGTTGATTGGTCCTATTATAGGCAACGGCTGAGCTCTGCAATACAAAAAATTATCACCATTCCTGCTGCAATGCAGAAGGTTGCAAATCCTGTCCCTAGGGTGGTTCATCCTGATTGGTTGCACAAAAAGGTTCGGGAGAAGCAGGACAAATTTCGCCAACGAAAATTAGTGGATGTCTTTAATAGCATGAACAGGGATGAACTCTCTAAAAAGCAAAGTAATTCTGATAATGTCTGCCATGTTATGAATGAAGAGGCTATTAATGACTTGGAGGATTTTGGTAACAAGACCGGGAACAATATTACTGGACCTAGACCAATTATACGACATTATGAAGCTAATAATAAACAGCACTCAGTCAAGCCTTATGGCAAAGAAGCTTCTGAGCAAAAACATAGTGATCATGGTAATGAGCGTCAGCCGCTAGCACAGTTAGGACGCAATGAATTGTCATCTGAAAATGTTGACAAAACAGTAGATTATCAAGGATGGCTCCAGACAAAGAAGAGAAAGTGGAAAGATATAATAGCAAGAAGAAAGAAGCAAAGATTGGGGAATTCAAAGAAATCTGACACCGCTAATAGCACTCTTGAAAGACTGAGAAATAAGATGGATCATAAAGCTCAGGGAAGAAGTAATGTTGATTCATATTTCAGAAGGCATGATGTAGTACTGACGCGGTCCTATTGGCAGATAATACAATTAATCCACAGTTCACAGATGGGCCAATTTTTTGCTTGGGTTGTTGTCGATGGGGTTATGCTTAAGATTCCAGTTTCTGTTCCTAGGGTCTTTTACCTCAATTCTAGGTCGCCAATTACTGAACATTTTATGGGTAAACGTGTCAACAAGACTCTTCCACATGGAAGGCATAGTTATAACTTGTACGAGGTTACAATTGATGAAGGTCAATTTAAAGAAACAAGCAGAAAGCTTGCAGCACTTCTGGCAGATCCTGACATTGAGGGAATATATGAAACAAAAGTGCCATTGGAATTTAATGCCATAGTCCAGCTCGGTTGTGTGTGCAAGGTGGACAAAACTGCTAAAAAACGCAGCCTTCAGGAACCTTGGAATCTGAGTGAGTTGCACATGAAGACCACTACAGAATGTTCTTATCTTGAACAGTCCATATCCTTCTTATACTTGTATAATAGCATCTCCGAGGGGCGGGCTATATATGTTGGATATTTTCCTGCATCAAAAGCAATATCTGTTGTGGTTGTTAATCCGTATCAAAACAAGGACTTATCCCCGGTATTTCTTGAAAGACAATTCCGTGATGCTTGTGAAGTTTTGTCTATTGAGACTCCTGCCAGAAATGGTATTAGATTTAAGGTGGACTACGTTTTGCATGTCAAGGATGCTGAAACGATGATGCAAAGAGTGATAAATGATCAAAGGAATGAGCATCATGGGCCTATGGTTGCTGTCATTGAATGTCCAAATCCACAACTAATGAAAATGGCTATTCGAGCTCTAGATGATTTTCCATGCCTGAACATTCCTTCTAATGCACGTGATTGTCAGTACCAGATTCTTGGATGGCAACAAGTTGCTGCAAAAACTGGAATGCATCGCTGTGCTGCTTCAGTCCAGTGGTTAAATGAGAGACTTTCTCTCGCAAGATATGCTCATGTGCCTTTAGGCAATTTTGAACTTGACTGGCTCATATTTGCCGCAGATATCTTCTTTTCTAGAGCACTGAGGGATAATCAACAGGTGCTTTGGATATCTGATGATGGCCTTCCCGATTTAGGCCGAATTAATGAAGAAGAGACATGTTTTGCTGATGAGGTCCACCAACCTGTTCTTACGTACCCTGGAGCTTACAGAAAAGTTACAGTAGAGCTAAAGATTCACCACCTGGCCGTGGATGCTCTTCTAAAAAGCAACCAAGTCAATGAGTTGGAAGGAGGTTCTTTGTTAGGATTTGATCATGACATAAACTCTGGACCATTTGCCGTAAATGATCAGAATGGCATTGATGAGGCCACCTCATGTGCACGAGCTTTTCGAGTCCTAAAGCAGTTAATCCAACGGTGCCTTGCAGATGCAGTTACATCTGGAAATATATATGCTGATGCAATATTGCAACATCTATACCGATGGCTATGCAGCCCTCAATCAAAACTTCATGATCCAGCTCTACACCAACTACTCCACAAGGTCATGCAGAAGGTTTTTGCATTGTTGTTGGTGGAGCTCCGTAAATTGGGTGCATCAATTGTTTTTGCAAACTTCTCAAAAATAATTATAGACACAGGAAAATTTGATCTGTCTGCAGCCAAAGCTTACTGTGATAGTTTGTTACGAACTCTACAATCTAGAGATTTATTTGAATGGATTGAACTTGAACCGCTTCAGTTCTGGAACTCATTGCTATTTATGGATCAGTATAACTATGGTGGAATACCAGCAAAATCTGATGAAGCTATAAATGATGAATCTCAAGTTGACATTATATCAAGTTGGAACATTGCCGATTACTTACCAAAGAAAATCCAGGACCACTTTGTTTTCATTGTTTCTCAATTCATGTACATTCCCTGGATCTATGCACAAAGACAAGCTGCAATGCCAACTTCATCACAAGATGGCGACTCCTGCACTCCATCAATCACTATTGGAGCTACAGAGAAATTTGAATCACATGTAACAGAGTATATTAAAGGGCAGATCAGCTCTTATTTCACAGACAAACTTCTGGGAATTGTTGGCGATATTATGCATCATATGAAGGAGATAAGACTAGAAAAAGACCAGAATGTATCATCTGGCAATCCTCAATTGGCAGCTGATTTCCACAAAGGGGATGCAGCCCTGGAATTTATCAAGCATGTTTGTGCCGTCCTCGCCCTGGACCAGAGTGTGCAGCATGATGTTCTGGTCATGAGAAAGAATTTGTTGAGATTTGTTCGTGTTAGGGAGTTTGCACCAGAAGCCGAGTTTCGTGATCAGAGTCACTCGTTCATATTACCTAATGTCATCTGCAGCTACTGCAACGATTGCAGGGATTTGGATTTGTGCCGGGACTCAGCTTTATTAAATCAAGAGTGGCAATGTGGCGTGCCGCAGTGTGGGCAGCCATATGATCGTGAGGTGATGGAAAATGCACTCCTTCAGATTGTACGACAGAGAGAACGACTATACCACTTGCAAGATCTGGTGTGTGTCAGATGTTACCAGGTCAAAGCTGCTCATTTAGCTGAGCAATGTGCTTGTGCCGGATCATACAAGTGCAAGGAAGATAGAACTGAATTTCGCAATAAGATGCAGGTTTTCTACAACATTGCTGTTCGCCAAAAATTCCAACTCCTTCAAGAATGCACCTCTTGGATTCTAGAATTGAGATAG 6645 0.4072 MNGENRRWDRKDSHRAKKQKLIRNAEEELEAKLGFDLFSEGEKRLGWLLNFSSSSWEDEDTHKVYSCVDLYFVSQDGSMFKSKYIFQPYFYVATKDKMEMEVEAYLRRRYENQITDIEIKEKEDLDLKNHLSGLQKSYLKLSFDTVQQLMNVKSDLMHVVERNQAKSDAAEAYESILTGRREQKFQDFLDYIIDLREYDVPYHVRFAIDNDIRSGQWYDVSVSNTGVTLEKRTDLLQRAEVRICAFDIETTKLPLKFPDADYDLIMMISYMVDGQGYLIINRECVGDDIEDLEYTPKPEFEGYFKVTNVQNEVELLRLWFSHMQEVKPSIYVTYNGDFFDWPFVERRATHHGFKMRDELGFQCDNNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYTTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHLSDPEKFYNNHLLESETYIGGHVECLESGVFRSDLPTSFTLEPSAYEQLINNLDRDLQYAIRVEGKVDLDSISNYDDVKNAIMEKLIKLRDKPICEECPLIYHLDVAAMYPNIILTNRLQPPSIVTEEVCTACDFNRPGKTCLRKLEWVWRGELFMAKKSDYYHLKRQIESEFVESTDRQSSKSFLDLPKSEQQSRLKERLKKYCQKAYKRVLDKPVTDIREAGICMRENPFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLVEKIGKPLELDTDGIWCALPGSFPENFTFKTKDLKRKLTISYPCVMLNVDVARNNTNDQYQTLTDTVRKTYATHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEQCYSAVATVANRWLDLLDNQGRDIADSELLDYISESSTMSKSLADYGEQKSCAVTTARRLADFLGDAMVKDKGLRCQYIVACEPKGTPVSARAVPVAIFETDAEVMKFYVRKWCKVSADVGIRSIVDWSYYRQRLSSAIQKIITIPAAMQKVANPVPRVVHPDWLHKKVREKQDKFRQRKLVDVFNSMNRDELSKKQSNSDNVCHVMNEEAINDLEDFGNKTGNNITGPRPIIRHYEANNKQHSVKPYGKEASEQKHSDHGNERQPLAQLGRNELSSENVDKTVDYQGWLQTKKRKWKDIIARRKKQRLGNSKKSDTANSTLERLRNKMDHKAQGRSNVDSYFRRHDVVLTRSYWQIIQLIHSSQMGQFFAWVVVDGVMLKIPVSVPRVFYLNSRSPITEHFMGKRVNKTLPHGRHSYNLYEVTIDEGQFKETSRKLAALLADPDIEGIYETKVPLEFNAIVQLGCVCKVDKTAKKRSLQEPWNLSELHMKTTTECSYLEQSISFLYLYNSISEGRAIYVGYFPASKAISVVVVNPYQNKDLSPVFLERQFRDACEVLSIETPARNGIRFKVDYVLHVKDAETMMQRVINDQRNEHHGPMVAVIECPNPQLMKMAIRALDDFPCLNIPSNARDCQYQILGWQQVAAKTGMHRCAASVQWLNERLSLARYAHVPLGNFELDWLIFAADIFFSRALRDNQQVLWISDDGLPDLGRINEEETCFADEVHQPVLTYPGAYRKVTVELKIHHLAVDALLKSNQVNELEGGSLLGFDHDINSGPFAVNDQNGIDEATSCARAFRVLKQLIQRCLADAVTSGNIYADAILQHLYRWLCSPQSKLHDPALHQLLHKVMQKVFALLLVELRKLGASIVFANFSKIIIDTGKFDLSAAKAYCDSLLRTLQSRDLFEWIELEPLQFWNSLLFMDQYNYGGIPAKSDEAINDESQVDIISSWNIADYLPKKIQDHFVFIVSQFMYIPWIYAQRQAAMPTSSQDGDSCTPSITIGATEKFESHVTEYIKGQISSYFTDKLLGIVGDIMHHMKEIRLEKDQNVSSGNPQLAADFHKGDAALEFIKHVCAVLALDQSVQHDVLVMRKNLLRFVRVREFAPEAEFRDQSHSFILPNVICSYCNDCRDLDLCRDSALLNQEWQCGVPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCVRCYQVKAAHLAEQCACAGSYKCKEDRTEFRNKMQVFYNIAVRQKFQLLQECTSWILELR 2214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03372 2214 FunFam DNA polymerase epsilon catalytic subunit 56 227 - -
Accr1g03372 2214 Gene3D DNA Polymerase, chain B, domain 1 51 231 - -
Accr1g03372 2214 SUPERFAMILY DNA/RNA polymerases 486 1115 IPR043502 -
Accr1g03372 2214 FunFam DNA polymerase epsilon catalytic subunit 756 937 - -
Accr1g03372 2214 FunFam DNA polymerase epsilon catalytic subunit 941 1125 - -
Accr1g03372 2214 SMART polmehr3 239 842 IPR006172 GO:0000166|GO:0003676|GO:0003887
Accr1g03372 2214 MobiDBLite consensus disorder prediction 1214 1247 - -
Accr1g03372 2214 PANTHER DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A 16 2212 IPR029703 GO:0003677|GO:0003887|GO:0006260|GO:0006281|GO:0008622
Accr1g03372 2214 FunFam DNA polymerase epsilon catalytic subunit 240 468 - -
Accr1g03372 2214 Gene3D Palm domain of DNA polymerase 750 937 IPR023211 -
Accr1g03372 2214 Pfam DNA polymerase family B, exonuclease domain 73 400 IPR006133 -
Accr1g03372 2214 Pfam DNA polymerase family B 756 1070 IPR006134 GO:0000166|GO:0003677
Accr1g03372 2214 Gene3D - 238 468 IPR036397 GO:0003676
Accr1g03372 2214 MobiDBLite consensus disorder prediction 1274 1295 - -
Accr1g03372 2214 SUPERFAMILY Ribonuclease H-like 57 467 IPR012337 -
Accr1g03372 2214 Coils Coil 11 31 - -
Accr1g03372 2214 CDD DNA_polB_epsilon_exo 240 443 - -
Accr1g03372 2214 CDD POLBc_epsilon 503 1122 - -
Accr1g03372 2214 SMART DUF1744_2 1517 1901 IPR013697 GO:0003887|GO:0005634|GO:0006260|GO:0008270
Accr1g03372 2214 MobiDBLite consensus disorder prediction 1218 1234 - -
Accr1g03372 2214 Gene3D - 941 1125 IPR042087 -
Accr1g03372 2214 Pfam Domain of unknown function (DUF1744) 1535 1901 IPR013697 GO:0003887|GO:0005634|GO:0006260|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03372 Accr-Chr1 70143860 70165342 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03372 1 2104 Core DNA Replication Machinery Family AT1G08260 71.530 0.0 3084
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03372 K02324 - cave:132163250 3770.7