Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03354 ATGGCGACCCACCGAATGGGAGAATCTGGTTTATCTGAGTCAGCACCTTCAACTTCAAGTCACCTGCATGCTCCATATGGGGTTCTTCATGGGATTAGTTCTCCTTCATCCAGCTTAGTCAATCAAGGATCTGGTTATTATTTTGGAGGATTGGAAGAGGCAATTCTGCAAGGAGTCAAGATTAGGAGTGAAGAAGCCAAAGCATCTTTATTCTCAGGCAAGCCTGCAACTACACTAGCAATGTTCCCTTCATGGCCCATGAGATTCCAGCACACCCCAAGAGAAGGTGGTTCAAAATCCGGAGGAGAGAGCACCGATTCAGAATCAGGATTGAATACTATTTCAAGCAAAACAGAAGCACAGTTTGAACCAGAATCAGAATCTCCCATGAGCAAAAAAGCATCCTGTACAGATTATCAGGCTTTTGATCAGCAGCAGAGACAGCAGCTACAGCAACTAGAACAGGATATGGCTAGCGATGCCTCAAGATGCCAAACACTACAGAATCAGAATCAATCACCCAATAATCCATTTCAGGCAAAGAGGAAGGGAGACGGTTCTAAATCAGAGAAGCAACTTGATCCAAAGACCTTGAGGCGTCTAGCTCAAAACAGAGAGGCTGCAAGGAAAAGCCGTCTCAGAAAAAAGGCGTACGTGCAGCAGCTAGAGTCAAGTAGATTAAAGCTTTCCCAGCTCGAACAAGAGCTTCAAAGAGCACGCTCTCAGGGACTATTGGTGGGCGGCGGCAGGACTGCTAGTGCCAATTTAAGTTCCGGTGCAGCAATATTCGACATGGAACATGGGAGATGGTTGGAAGAAGACCAGCGACACATGGAGGAGCTGCGGCGGAGCTTGGAGGCAGCGGTGTCGGACAATGAACTGAGAGTGATGGTGGAGAATTACCTGAGACACTACGACGAGATATTTGAACTGAAGGGAGTGGCAGCAAAATCAGACGTGTTTCACGTCATGAACGGAATGTGGACCACCCCCGCCGAGCGATGCTTCCTCTGGATTTCTGGCTTCCGACCCTCAGATCTCATTGGGATGTTGATACAGCAGCTAGAGCCAGTGGCGGAGCGGCAAATATTAGGGATGTGTGAACTGAGGCAGTCGACACAGCAGGCGGAGGAGGCTCTGACTCAAGGACTCGACCAGCTTCAGCACTCTCTTCTTCACACCGTTGTCGGAGGCCTCGATGTCGACGGCGTTCAACAGATGTTTCTGGCCATGACCAAGCTTTCCAATCTTGAAGCCTTTATCCGCCAGGCTGATAATTTGAGACAGCAAACACTTCACCGTTTGTGTCAACTACTAACAGTTCGTCAAGCAGCAAGATGTTTTCTTGTGATCGGAGAGTACTATGGTCGTCTTCGAGCTCTTAGTTCTCTATGGGCTTCACGACCACGAGAGTCATTGATCAACGATGAGACATGCCACCAAATAACAACAAACATGCCAATAGTTCATCAGTCGTCGCAGAATCATTTCTCAAGTTTCTGA 1503 0.481 MATHRMGESGLSESAPSTSSHLHAPYGVLHGISSPSSSLVNQGSGYYFGGLEEAILQGVKIRSEEAKASLFSGKPATTLAMFPSWPMRFQHTPREGGSKSGGESTDSESGLNTISSKTEAQFEPESESPMSKKASCTDYQAFDQQQRQQLQQLEQDMASDASRCQTLQNQNQSPNNPFQAKRKGDGSKSEKQLDPKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLSQLEQELQRARSQGLLVGGGRTASANLSSGAAIFDMEHGRWLEEDQRHMEELRRSLEAAVSDNELRVMVENYLRHYDEIFELKGVAAKSDVFHVMNGMWTTPAERCFLWISGFRPSDLIGMLIQQLEPVAERQILGMCELRQSTQQAEEALTQGLDQLQHSLLHTVVGGLDVDGVQQMFLAMTKLSNLEAFIRQADNLRQQTLHRLCQLLTVRQAARCFLVIGEYYGRLRALSSLWASRPRESLINDETCHQITTNMPIVHQSSQNHFSSF 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03354 500 MobiDBLite consensus disorder prediction 97 182 - -
Accr1g03354 500 FunFam BZIP family transcription factor 195 244 - -
Accr1g03354 500 CDD bZIP_HBP1b-like 196 248 - -
Accr1g03354 500 ProSiteProfiles DOG1 domain profile. 260 468 IPR025422 GO:0006351|GO:0043565
Accr1g03354 500 Pfam bZIP transcription factor 196 236 IPR004827 GO:0003700|GO:0006355
Accr1g03354 500 MobiDBLite consensus disorder prediction 82 199 - -
Accr1g03354 500 Coils Coil 271 291 - -
Accr1g03354 500 SMART brlzneu 192 257 IPR004827 GO:0003700|GO:0006355
Accr1g03354 500 PANTHER TRANSCRIPTION FACTOR TGA9 139 471 - -
Accr1g03354 500 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 194 238 IPR004827 GO:0003700|GO:0006355
Accr1g03354 500 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 199 214 IPR004827 GO:0003700|GO:0006355
Accr1g03354 500 Gene3D - 195 244 - -
Accr1g03354 500 Coils Coil 215 242 - -
Accr1g03354 500 SUPERFAMILY Leucine zipper domain 196 238 IPR046347 GO:0003700|GO:0006355
Accr1g03354 500 Coils Coil 150 170 - -
Accr1g03354 500 MobiDBLite consensus disorder prediction 183 199 - -
Accr1g03354 500 Pfam Seed dormancy control 277 351 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03354 Accr-Chr1 69973802 69979585 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03354 173 500 bZIP Transcription Factor Family AT1G08320 66.768 1.86e-159 455
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Accr1g03354 DOG1 8.6e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03354 K14431 - gmx:778123 639.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g03354 1 69973802 69979585 Accr13g00450 13 4582697 4589271 CCT
Accr1g03354 1 69973802 69979585 Accr1g03354 1 69973802 69979585 ECH