Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03352 ATGTATCATCATAATCACCAGAATCACGCAAAGAACATGCATTCTTCTTCTTCTTCCAGATTGGCGATTCCTTCTGAGAGGCATTTGTTCCTTCAAGGTGGAAATGCGTCTGGAGATTCTGGACTTGTGCTGTCAACTGATGCTAAACCCAGGTTGAAATGGACAGCTGATCTTCATGCCCGATTTATTGAAGCAGTCAATCAGCTGGGAGGAGCTGACAAAGCAACTCCAAAAACAGTAATGAAACTCATGGGGATTCCAGGGCTAACTTTATATCATCTTAAGAGCCATCTTCAGAAGTACAGACTGAGCAAGAATCTGCCTGGACAAAGTAGCAGTAGTGTGACACACAAAATCACAACAAATGCAAGTGCCGTTAGCGGAGAAAGAATTTCTGAAGCAAATGGAACTCATCATCACAATCATATAAACAATCTAACCCTTGGGGCGCCGCAGGCTAATAATAACAAAGATTTACATATAAGCGAGGCGTTGCAGATGCAGATTGAGGTGCAGAGAAGGCTAAATGAACAACTTGAGGTTCAAAGACACTTGCAGCTGCGAATAGAGGCGCAAGGGAAATACCTGCAGGCAGTGCTGGAGAAAGCACAGGAGACGCTTGGGAGACAGAATTTAGGAATAGTAGGTCTCGAAGCTGCCAAAGTTCAGCTCTCAGAACTAGTCTCCAAAGTATCCTCTCAGTGTCTGAGTTCTGCTTTTTCAGAGCTGAAGGAATTAAACACATTCTGCCCACGAACCAACCAACCCAATGACTGCTCCATGGACAGTAGCCTCACTTCCTGCGATGCATCTCAAAGGGATCATCAGGACATGCCCCTTGCTGGTGGTATGTGCTTAACCAGAGCTTTTAACGGTCACACCTTCATGGAACCCAAGAAGGACACCCCTGAGGTCAAAACGAACAATAATAATTTTCTGAACCCTTTGGGGAAGAATATATCAGAAAGAAGTACTGGCAACTTAACAATGAGCATTGGAGTTGAAGGAGAAACGAGAAACGGAAGCAGCAGCATCTATCCTGAGAGAATAAGCACCAATAATAGAACAGAAGGGATGAAATTAGGAGTGGACGAAAAAGTTGGCGGAGATTATAGATTGCCGTACTTTGCAGCGCCAAGGTTAGACCTTAACGTCCACCAAGAGAACGATGGTGCCGCCAGTTGTAAACAACTAGACCTCAATGGATTCAGCTGGAACTGA 1221 0.4464 MYHHNHQNHAKNMHSSSSSRLAIPSERHLFLQGGNASGDSGLVLSTDAKPRLKWTADLHARFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLPGQSSSSVTHKITTNASAVSGERISEANGTHHHNHINNLTLGAPQANNNKDLHISEALQMQIEVQRRLNEQLEVQRHLQLRIEAQGKYLQAVLEKAQETLGRQNLGIVGLEAAKVQLSELVSKVSSQCLSSAFSELKELNTFCPRTNQPNDCSMDSSLTSCDASQRDHQDMPLAGGMCLTRAFNGHTFMEPKKDTPEVKTNNNNFLNPLGKNISERSTGNLTMSIGVEGETRNGSSSIYPERISTNNRTEGMKLGVDEKVGGDYRLPYFAAPRLDLNVHQENDGAASCKQLDLNGFSWN 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03352 406 FunFam Myb family transcription factor 48 106 - -
Accr1g03352 406 SUPERFAMILY Homeodomain-like 48 104 IPR009057 -
Accr1g03352 406 Coils Coil 162 182 - -
Accr1g03352 406 NCBIfam myb-like DNA-binding domain, SHAQKYF class 49 104 IPR006447 GO:0003677
Accr1g03352 406 Pfam Myb-like DNA-binding domain 51 102 IPR001005 -
Accr1g03352 406 Gene3D - 48 106 - -
Accr1g03352 406 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 46 106 IPR017930 -
Accr1g03352 406 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 5 290 IPR044848 GO:0003700
Accr1g03352 406 Pfam MYB-CC type transfactor, LHEQLE motif 160 206 IPR025756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03352 Accr-Chr1 69950108 69952393 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03352 81 406 G2-like Transcription Factor Family AT3G04030 46.686 2.46e-77 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Accr1g03352 Myb_DNA-binding 1.2e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03352 - - gmx:100810396 499.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g03352 1 69950108 69952393 Accr13g00454 13 4634022 4636385 CCT