Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03350 ATGGGAGAGACAGAGAAGGTGGTGCCGGAGGCCGAGGAGCTGCCCAAGGCTATAGTGCGCCGGGTGGTGAAAGACGAGCTCTCACGGTGCTCCCACGACGGAGACATTTCCATTCACAAAGATGCCCTCCTCGCTTTCTCGGAAAGCGCGCGGATCTTCATCCACTACCTTTCCGCAACGGCCAACGACATATGCAAGGAATCAAAGAGGCAGATAATAAGCGCCGATGATGTATTTAAAGCTCTTGAAGAGACTGAGTACTCCGAGTTTGTCCGGCCCCTAAAAGCTTCTCTTGAAGAGTTTAGGAAGAAGAATGCCGGAAAGAGAGCGGGTGCGTCAAAGGAAAAGGATGGAAAAAAGAAAAGGAAGTTAGAGGATGAGGCATCTGATAAAGATGAGGGTGGTGACGATGACAAATGA 420 0.5048 MGETEKVVPEAEELPKAIVRRVVKDELSRCSHDGDISIHKDALLAFSESARIFIHYLSATANDICKESKRQIISADDVFKALEETEYSEFVRPLKASLEEFRKKNAGKRAGASKEKDGKKKRKLEDEASDKDEGGDDDK 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03350 139 FunFam DNA polymerase epsilon subunit 3 6 139 - -
Accr1g03350 139 PANTHER DNA POLYMERASE EPSILON SUBUNIT 3 10 136 - -
Accr1g03350 139 SUPERFAMILY Histone-fold 14 121 IPR009072 GO:0046982
Accr1g03350 139 Gene3D Histone, subunit A 5 139 IPR009072 GO:0046982
Accr1g03350 139 MobiDBLite consensus disorder prediction 104 129 - -
Accr1g03350 139 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 13 82 IPR003958 -
Accr1g03350 139 MobiDBLite consensus disorder prediction 104 139 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03350 14 118 CCAAT-HAP3 Transcription Factor Family AT5G47640 32.381 5.41e-12 58.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Accr1g03350 CBFD_NFYB_HMF 7e-09 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03350 K02326 - mnt:21405152 199.904