Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03322 ATGGCTGGCGTGGTTTCAAGGGAGGCACAGATGTCGATCGCCGCTTCCTCCATGTTTCCTGGATTCAGGTTCTGTCCTACCGACGAAGAATTGATTTCCTATTATCTCAGGAAGAAGTTGGACGGCCATGAAGAGAGCGTTCAAGTTATTTCTGAGGTTGAGATTTGCAGACATGAGCCTTGGGATTTACCGGCCAAATCATCCATTCAATCAGATACCGAGTGGTTCTTCTTTTCTCCTCGTGGAAGAAAGTACCCAAATGGTTCACAAAGTAAGAGGGCAACCGAATGTGGCTATTGGAAGGCCACTGGAAAAGAGCGCAATGTAAAGTCAGGTTCTGATGTTATAGGCACCAAGCGAACTTTGGTATTCCATATGGGTCGTGCCCCAAAAGGGGAAAGGACTGAATGGATTATGCACGAGTACTGCATCAACGACAAATCCCAGGATTCTTTAGTTGTTTGTCGGCTAAAGAGGAACACAGAGTTTCGTCATAACGACGCTTCAAACAGAGCATCTTCAAGTCAACAGCAGGCGGTGAATTCTCATGAAAGCAATTGTGCTGTGTCAGAAGCTGAGATAGATGAAAGGGGCGTGTCCGAGCGAGATAAAGGGGTTGGATGCAGTTCAAAACGCAGCAGTTGCAGTTACGATTCTCCTTCAGTGGAGCAAATTGATTCTGCCTGTGAATCCAATCAAAGAACAGTCAACTATGACGCTGCTGTGGCGGAATCTTCGAGTCACCAAAAGGAGGTGGATGAAGAGGATTGTTATGCTGAGATACTGAAGAACGATATCATCAAATTAGATGAATCTTCACTGACGTCGCAAGAGGCTCATTCAATATCGCAGGATCCTCCTCAGGCAGTTCCATTCCAAGGCACAGCTCAACGAAGAATTAGATTAAAGGTGGATAAACCAAAGCACTGTGCTGCTGCAAGGTTTGGCTTTCCAAGCTCCAAGCGCCCTTCCAAGACTAACACCCTCTTTGGTTCACTGACAAACGGAGTGCTGTTGTGTGTTTTCTTCGTTTTAACTTTGGTAGCCTTATGTTTGTCCTTAATGGGTTTGGGTTTGGGAAGTCTCAACCCTATGAAAAGCTGTGAGAGATTTGGTTCCGCATGTAAATTATGA 1134 0.4559 MAGVVSREAQMSIAASSMFPGFRFCPTDEELISYYLRKKLDGHEESVQVISEVEICRHEPWDLPAKSSIQSDTEWFFFSPRGRKYPNGSQSKRATECGYWKATGKERNVKSGSDVIGTKRTLVFHMGRAPKGERTEWIMHEYCINDKSQDSLVVCRLKRNTEFRHNDASNRASSSQQQAVNSHESNCAVSEAEIDERGVSERDKGVGCSSKRSSCSYDSPSVEQIDSACESNQRTVNYDAAVAESSSHQKEVDEEDCYAEILKNDIIKLDESSLTSQEAHSISQDPPQAVPFQGTAQRRIRLKVDKPKHCAAARFGFPSSKRPSKTNTLFGSLTNGVLLCVFFVLTLVALCLSLMGLGLGSLNPMKSCERFGSACKL 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03322 377 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 17 233 - -
Accr1g03322 377 ProSiteProfiles NAC domain profile. 18 160 IPR003441 GO:0003677|GO:0006355
Accr1g03322 377 Pfam No apical meristem (NAM) protein 20 143 IPR003441 GO:0003677|GO:0006355
Accr1g03322 377 Gene3D NAC domain 27 165 IPR036093 GO:0003677|GO:0006355
Accr1g03322 377 MobiDBLite consensus disorder prediction 189 208 - -
Accr1g03322 377 MobiDBLite consensus disorder prediction 166 220 - -
Accr1g03322 377 SUPERFAMILY NAC domain 10 159 IPR036093 GO:0003677|GO:0006355
Accr1g03322 377 MobiDBLite consensus disorder prediction 167 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03322 Accr-Chr1 69734901 69736676 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03322 5 279 NAC Transcription Factor Family AT2G27300 53.623 7.57e-96 287
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Accr1g03322 NAM 6.8e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03322 - - cam:101495489 466.848