Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03321 ATGACGGGAGCCGAGCAAATGGCTGGCGTGGTTTCAAGGGAGGCACAGATGTCGATCGCCGCTTCCTCCATGTTTCCTGGATTCAGGTTCTGTCCTACCGACGAAGAATTGATTTCCTATTATCTCAGGAAGAAGTTGGACGGCCATGAAGAGAGCGTTCAAGTTATTTCTGAGGTTGAGATTTGCAGACATGAGCCTTGGGATTTACCGGCCAAATCATCCATTCAATCAGATACCGAGTGGTTCTTCTTTTCTCCTCGTGGAAGAAAGTACCCAAATGGTTCACAAAGTAAGAGGGCAACCGAATGTGGCTATTGGAAGGCCACTGGAAAAGAGCGCAATGTAAAGTCAGGTTCTGATGTTATAGGCACCAAGCGAACTTTGGTATTCCATATGGGTCGTGCCCCAAAAGGGGAAAGGACTGAATGGATTATGCACGAGTACTGCATCAACGACAAATCCCAGGATTCTTTAGTTGTTTGTCGGCTAAAGAGGAACACAGAGTTTCGTCATAACGACGCTTCAAACAGAGCATCTTCAAGTCAACAGCAGGCGGTGAATTCTCATGAAAGCAATTGTGCTGTGTCAGAAGCTGAGATAGATGAAAGGGGCGTGTCCGAGCGAGATAAAGGGGTTGGATGCAGTTCAAAACGCAGCAGTTGCAGTTACGATTCTCCTTCAGTGGAGCAAATTGATTCTGCCTGTGAATCCAATCAAAGAACAGTCAACTATGACGCTGCTGTGGCGGAATCTTCGAGTCACCAAAAGGAGGTGGATGAAGAGGATTGTTATGCTGAGATACTGAAGAACGATATCATCAAATTAGATGAATCTTCACTGACGTCGCAAGAGGCTCATTCAATATCGCAGGATCCTCCTCAGGCAGTTCCATTCCAAGGCACAGCTCAACGAAGAATTAGATTAAAGGTGGATAAACCAAAGCACTGTGCTGCTGCAAGGTTTGGCTTTCCAAGCTCCAAGCGCCCTTCCAAGACTAACACCCTCTTTGGTTCACTGACAAACGGAGTGCTGTTGTGTGTTTTCTTCGTTTTAACTTTGGTAGCCTTATGTTTGTCCTTAATGGGTTTGGGTTTGGGAAGTCTCAACCCTATGAAAAGCTGTGAGAGATTTGGTTCCGCATGTAAATTATGA 1152 0.4583 MTGAEQMAGVVSREAQMSIAASSMFPGFRFCPTDEELISYYLRKKLDGHEESVQVISEVEICRHEPWDLPAKSSIQSDTEWFFFSPRGRKYPNGSQSKRATECGYWKATGKERNVKSGSDVIGTKRTLVFHMGRAPKGERTEWIMHEYCINDKSQDSLVVCRLKRNTEFRHNDASNRASSSQQQAVNSHESNCAVSEAEIDERGVSERDKGVGCSSKRSSCSYDSPSVEQIDSACESNQRTVNYDAAVAESSSHQKEVDEEDCYAEILKNDIIKLDESSLTSQEAHSISQDPPQAVPFQGTAQRRIRLKVDKPKHCAAARFGFPSSKRPSKTNTLFGSLTNGVLLCVFFVLTLVALCLSLMGLGLGSLNPMKSCERFGSACKL 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03321 383 Pfam No apical meristem (NAM) protein 26 149 IPR003441 GO:0003677|GO:0006355
Accr1g03321 383 Gene3D NAC domain 33 171 IPR036093 GO:0003677|GO:0006355
Accr1g03321 383 ProSiteProfiles NAC domain profile. 24 166 IPR003441 GO:0003677|GO:0006355
Accr1g03321 383 SUPERFAMILY NAC domain 16 165 IPR036093 GO:0003677|GO:0006355
Accr1g03321 383 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 23 239 - -
Accr1g03321 383 MobiDBLite consensus disorder prediction 172 226 - -
Accr1g03321 383 MobiDBLite consensus disorder prediction 195 214 - -
Accr1g03321 383 MobiDBLite consensus disorder prediction 173 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03321 Accr-Chr1 69734901 69736694 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03321 11 285 NAC Transcription Factor Family AT2G27300 53.623 8.67e-96 287
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Accr1g03321 NAM 7e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03321 - - cam:101495489 466.848