Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03313 ATGGGGACGTTCTTTCATGGAGGCAACTCAGAAATCCAATCCTCCGGTGCTTCTGGCGATGGCTTCCACACACTTTACCTTCTCAACCCCAGCCCCACCACCCCCTACGCTCCCTACTCCGATGCAAGTCCCCACCCTCAACCCACACCCAACTCGCTTCTTCTCAATCCCAACAACTCTCCCCCCAACGCCCTCAACCTCGCCAACTTCTCCAACCATAACCCTGACGATCCCTCCCGTTCCTCCTTCCTCTCACACGATATCTCCGCCTTCCACGGCTTTACCGCCGTGGCTCCTCCGCGTGTTCACCACAACCTCTGGGCTTCAATGATTGATCCTCACCCAACATCTAGCAGTTCCGGTGGGGGTCCCTCCGCCTCCGCCACCCTCGACGTGTCGCCCCATATGAATTTCAGGAGGCCTACTCATCAGCAGCAAGGTCTGTCGCTGAGCCTCTCATCTCAGCAGACACCTTATAGGTCGCTTTCCGGCGAGCTACACGTTCCTGGACAACCTCCAGCTGCTGCCATACCAACCTCCAGTTGCGATGATGTCCGGATTCTGGTTCCAAGTAATCATGCCTCGGCGAATGGAATTTCGAGTGTGCAGAGTTTTGTTTTAGGATCAAAGTACTTGAGAGCAGCTCAGGAGGTTTTGGAAGAAGTTGTTATTGTGGGCAAGGGAATAATCAACCAGGAGGGGGCTATGAAAGAGAAAATGAAAGCCAATAAAGAATCGACATCTGGTTGGAATCGTGACGGTTCAAGTGGTGGTGATGGAGGAGGACGAGGAGGGGAAAATAGTGGAAATGGGAAGCAAGGAGTTGAACTCAGTACAGCACAAAGACAAGAACTTCAGATGAAGAAGTCCAAGCTTGTCACCATACTTGATGAGGTGGAACAAAGGTACAGACAGTATCACCACCAAATGCAGATAGTGATGGCATCATTTGAGCAGGCTGCGGGGTATGGTGCAGCCAAAACATACACATCCCTTGCCCTAAAGACCATCTCTAAGCAATTTCGATGTCTCAGAGACGCAATCGCCTCACAAATAAGAGCGACAGGCAAAAGTTTGGGCGAAGAAGATTGCTTGGGAGCTAAGGTAGAAGGTTCCAGGCTGAGGTTTGTGGACCATCATCTTCGCCAACAACGCGCTTTACAGCAACTGGGAATGGTACAACACAATGCTTGGAGGCCCCAAAGAGGCTTGCCTGAACGAGCCGTCTCCATTCTTCGTGCTTGGCTCTTCGAGCATTTTCTTCACCCCTATCCCAAGGACTCTGATAAAGTTATGCTTGCAAAACAAACTGGCCTTACTCGTAGCCAGGTGTCAAACTGGTTCATAAATGCGAGAGTTCGGCTATGGAAACCAATGGTGGAAGAAATGTACATGGAAGAAATGAAAGAGCAAGAGGGGAATAATAATAATGAGGAGGTGGGGTCAAGCACTAAGGATAATTCACAGCCACAGGATCCGGGTGGGCTTCTGCTTGATCATCATCAGATGAAAGGCTTGCAATCAAATCCAGATCAAAGCTTCAATAACCAAACATCTACCCCGACCGACATCTCAAACCCCTCATCAATCTATCTTACAGGATTTCCCGTTGGATCATCTTCTCACCATCATTTTGACATGCAAATAAGGAAGAGTCCCAAAAAGCCAAGAAGTTCAGAAGTAATGAACAACTCTCCAAGCAGTATCCTGTCGGTGGACATGGAAATGAAGCCCGGAGACACAGACAGATCAGAAGGAAACGCAAAGTCGTTTGGAATGGAAAGGCGCAGTTTGATAAGCAATAATAATGGAGGAGGATACGGAGGATTCACCATACAAGACATGGGAAGGTACAACGTGGCTGACCAATTGGCTCCAAGGTTCCATGGAAACGGCGTGTCGCTCACTCTTGGACTTCCACATAACAGTACTGAAAACCTTCCCCGCCATGAATTTCTGTCTCACAATATGAACTTGGCTACTGACGGAACCGACTTCTGTGCGGTCAACGCTCCACCGCCGTCTCATTCCAACGGCAGTTATGACAATATTGATCACATTCAGAACAGAAAGAGGTTTGCTGCCCAGTTAGTGCCAGATTTTGTGGCCTGA 2112 0.4929 MGTFFHGGNSEIQSSGASGDGFHTLYLLNPSPTTPYAPYSDASPHPQPTPNSLLLNPNNSPPNALNLANFSNHNPDDPSRSSFLSHDISAFHGFTAVAPPRVHHNLWASMIDPHPTSSSSGGGPSASATLDVSPHMNFRRPTHQQQGLSLSLSSQQTPYRSLSGELHVPGQPPAAAIPTSSCDDVRILVPSNHASANGISSVQSFVLGSKYLRAAQEVLEEVVIVGKGIINQEGAMKEKMKANKESTSGWNRDGSSGGDGGGRGGENSGNGKQGVELSTAQRQELQMKKSKLVTILDEVEQRYRQYHHQMQIVMASFEQAAGYGAAKTYTSLALKTISKQFRCLRDAIASQIRATGKSLGEEDCLGAKVEGSRLRFVDHHLRQQRALQQLGMVQHNAWRPQRGLPERAVSILRAWLFEHFLHPYPKDSDKVMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYMEEMKEQEGNNNNEEVGSSTKDNSQPQDPGGLLLDHHQMKGLQSNPDQSFNNQTSTPTDISNPSSIYLTGFPVGSSSHHHFDMQIRKSPKKPRSSEVMNNSPSSILSVDMEMKPGDTDRSEGNAKSFGMERRSLISNNNGGGYGGFTIQDMGRYNVADQLAPRFHGNGVSLTLGLPHNSTENLPRHEFLSHNMNLATDGTDFCAVNAPPPSHSNGSYDNIDHIQNRKRFAAQLVPDFVA 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03313 703 MobiDBLite consensus disorder prediction 468 588 - -
Accr1g03313 703 MobiDBLite consensus disorder prediction 475 491 - -
Accr1g03313 703 SUPERFAMILY Homeodomain-like 399 465 IPR009057 -
Accr1g03313 703 Coils Coil 282 302 - -
Accr1g03313 703 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 124 482 - -
Accr1g03313 703 SMART HOX_1 398 462 IPR001356 GO:0003677
Accr1g03313 703 SMART prehox3 200 350 IPR006563 -
Accr1g03313 703 MobiDBLite consensus disorder prediction 113 132 - -
Accr1g03313 703 Pfam Associated with HOX 206 349 IPR006563 -
Accr1g03313 703 ProSiteProfiles 'Homeobox' domain profile. 395 458 IPR001356 GO:0003677
Accr1g03313 703 MobiDBLite consensus disorder prediction 35 81 - -
Accr1g03313 703 FunFam BEL1-like homeodomain protein 9 401 463 - -
Accr1g03313 703 MobiDBLite consensus disorder prediction 240 274 - -
Accr1g03313 703 Gene3D - 401 480 - -
Accr1g03313 703 CDD homeodomain 398 458 IPR001356 GO:0003677
Accr1g03313 703 MobiDBLite consensus disorder prediction 505 536 - -
Accr1g03313 703 MobiDBLite consensus disorder prediction 46 81 - -
Accr1g03313 703 Pfam Homeobox KN domain 415 454 IPR008422 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03313 Accr-Chr1 69660433 69663453 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03313 1 703 Homeobox Transcription Factor Family AT2G35940 40.999 1.12e-126 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Accr1g03313 POX 2.4e-47 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03313 - - gmx:100779075 667.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g03313 1 69660433 69663453 Accr13g00509 13 5292862 5296559 CCT
Accr1g03313 1 69660433 69663453 Accr1g03313 1 69660433 69663453 ECH