Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03303 ATGAGGCGACTTTCATACAAGGATGTTAAAAGAGCAACGGATGGTTTTCACAGAATTATCTATAGCAATTCTCAAGTTGCTGCATATGCTGCCAAATTTGAAGATGGTAGCGCTTCTTTGGTGAAAGAAATAAAGGATTTTGATCAAGCAGATGACAGTTTCTACAGCGAAGTGCAATTCTTGGGCCGCTTGCATCATCGACACCTTTTGTCCCTCAAAGGATTTTCCTTGAATAGGAAGAGATTGCTCATTTTTGACAGCATAGAGAATGGAAGCTTGAAGGATCATCTAAATGATCCCCTGAAGACACCCTTAAATTGGAGGACAAGGTTACAGATAGCTATTGATGTTGTGGCTGCCCTGGAATACTTGTTTCTCTTCGTTGAACAACCACTATGTCGTGTCTCCATCAGCTCTAGCAATATCATGTTTGATGATAATTTTACAGCTAAACTATCTGATTATGGTCTTCTTACTTGTGTTGGAAATCCTGTTATGATGACGAATTCAAAAGATGACAGCATGAGGCAGAAAAGTGGTAACATAATATACCAATTGGGAGTTTTCATACTGGAGCTTGTCACTGGTCAGTCTTCAGAGATGGAAGGTTCAGATCTAATAGAATGGATCCAGGAATCACGCTTCTACAGTTCCATTCATAACATGGTGGACCCTGATCTGGGCGACAATTACGATTCTAGGGAGTTAAAAACCCTTCTAGCTGTTGCAAAGTTATGTATCAAATCAAGGGACAAGCCTGTATTTACAATCCCCCAGTTATTTCGATATCTTCAGCACAAGGTGGATATTCCTCGTGACTAA 822 0.4015 MRRLSYKDVKRATDGFHRIIYSNSQVAAYAAKFEDGSASLVKEIKDFDQADDSFYSEVQFLGRLHHRHLLSLKGFSLNRKRLLIFDSIENGSLKDHLNDPLKTPLNWRTRLQIAIDVVAALEYLFLFVEQPLCRVSISSSNIMFDDNFTAKLSDYGLLTCVGNPVMMTNSKDDSMRQKSGNIIYQLGVFILELVTGQSSEMEGSDLIEWIQESRFYSSIHNMVDPDLGDNYDSRELKTLLAVAKLCIKSRDKPVFTIPQLFRYLQHKVDIPRD 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03303 273 Gene3D Transferase(Phosphotransferase) domain 1 183 272 - -
Accr1g03303 273 SMART tyrkin_6 21 261 IPR020635 GO:0004713|GO:0006468
Accr1g03303 273 FunFam probable receptor-like protein kinase At1g49730 183 272 - -
Accr1g03303 273 FunFam Protein kinase superfamily protein 1 86 - -
Accr1g03303 273 PANTHER OS01G0253100 PROTEIN 1 268 - -
Accr1g03303 273 Gene3D Phosphorylase Kinase; domain 1 1 86 - -
Accr1g03303 273 Gene3D Transferase(Phosphotransferase) domain 1 88 182 - -
Accr1g03303 273 SUPERFAMILY Protein kinase-like (PK-like) 3 241 IPR011009 -
Accr1g03303 273 ProSiteProfiles Protein kinase domain profile. 6 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g03303 273 Pfam Protein tyrosine and serine/threonine kinase 38 164 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03303 Accr-Chr1 69555961 69557879 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03303 2 269 Receptor kinase-like Gene Family AT3G19300 37.113 8.91e-58 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-1 Accr1g03303 PK_Tyr_Ser-Thr 1.3e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03303 - - gmx:100791979 387.882