Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03301 ATGGATCCCTTGATCCGCAAGCTGCGCCGCCGCCTTCTTGCATGGCTTCGCCGATCTCGCTCTGATCGAATACACTTTATGAGGCGACTTTCATACAAGGATGTTAAAAGAGCAACGGATGGTTTTCACAGAATTATCTATAGCAATTCTCAAGTTGCTGCATATGCTGCCAAATTTGAAGATGGTAGCGCTTCTTTGGTGAAAGAAATAAAGGATTTTGATCAAGCAGATGACAGTTTCTACAGCGAAGTGCAATTCTTGGGCCGCTTGCATCATCGACACCTTTTGTCCCTCAAAGGATTTTCCTTGAATAGGAAGAGATTGCTCATTTTTGACAGCATAGAGAATGGAAGCTTGAAGGATCATCTAAATGATCCCCTGAAGACACCCTTAAATTGGAGGACAAGGTTACAGATAGCTATTGATGTTGTGGCTGCCCTGGAATACTTGTTTCTCTTCGTTGAACAACCACTATGTCGTGTCTCCATCAGCTCTAGCAATATCATGTTTGATGATAATTTTACAGCTAAACTATCTGATTATGGTCTTCTTACTTGTGTTGGAAATCCTGTTATGATGACGAATTCAAAAGATGACAGCATGAGGCAGAAAAGTGGTAACATAATATACCAATTGGGAGTTTTCATACTGGAGCTTGTCACTGGTCAGTCTTCAGAGATGGAAGGTTCAGATCTAATAGAATGGATCCAGGAATCACGCTTCTACAGTTCCATTCATAACATGGTGGACCCTGATCTGGGCGACAATTACGATTCTAGGGAGTTAAAAACCCTTCTAGCTGTTGCAAAGTTATGTATCAAATCAAGGGACAAGCCTGTATTTACAATCCCCCAGTTATTTCGATATCTTCAGCACAAGGTGGATATTCCTCGTGACTAA 900 0.4156 MDPLIRKLRRRLLAWLRRSRSDRIHFMRRLSYKDVKRATDGFHRIIYSNSQVAAYAAKFEDGSASLVKEIKDFDQADDSFYSEVQFLGRLHHRHLLSLKGFSLNRKRLLIFDSIENGSLKDHLNDPLKTPLNWRTRLQIAIDVVAALEYLFLFVEQPLCRVSISSSNIMFDDNFTAKLSDYGLLTCVGNPVMMTNSKDDSMRQKSGNIIYQLGVFILELVTGQSSEMEGSDLIEWIQESRFYSSIHNMVDPDLGDNYDSRELKTLLAVAKLCIKSRDKPVFTIPQLFRYLQHKVDIPRD 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03301 299 Gene3D Transferase(Phosphotransferase) domain 1 209 298 - -
Accr1g03301 299 Pfam Protein tyrosine and serine/threonine kinase 64 190 IPR001245 GO:0004672|GO:0006468
Accr1g03301 299 ProSiteProfiles Protein kinase domain profile. 32 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g03301 299 SMART tyrkin_6 24 287 IPR020635 GO:0004713|GO:0006468
Accr1g03301 299 FunFam probable receptor-like protein kinase At1g49730 209 298 - -
Accr1g03301 299 PANTHER OS01G0253100 PROTEIN 25 294 - -
Accr1g03301 299 FunFam Protein kinase superfamily protein 16 112 - -
Accr1g03301 299 Gene3D Phosphorylase Kinase; domain 1 12 112 - -
Accr1g03301 299 SUPERFAMILY Protein kinase-like (PK-like) 24 267 IPR011009 -
Accr1g03301 299 Gene3D Transferase(Phosphotransferase) domain 1 114 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03301 Accr-Chr1 69555509 69557879 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03301 28 295 Receptor kinase-like Gene Family AT3G19300 37.113 4.69e-57 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-1 Accr1g03301 PK_Tyr_Ser-Thr 1.6e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03301 - - gmx:100791979 407.912