Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03300 ATGGATCCCTTGATCCGCAAGCTGCGCCGCCGCCTTCTTGCATGGCTTCGCCGATCTCGCTCTGATCGAATACACTTTATGAGGCGACTTTCATACAAGGATGTTAAAAGAGCAACGGATGGTTTTCACAGAATTATCTATAGCAATTCTCAAGTTGCTGCATATGCTGCCAAATTTGAAGATGGTAGCGCTTCTTTGGTGAAAGAAATAAAGGATTTTGATCAAGCAGATGACAGTTTCTACAGCGAAGTGCAATTCTTGGGCCGCTTGCATCATCGACACCTTTTGTCCCTCAAAGGATTTTCCTTGAATAGGAAGAGCAGATTGCTCATTTTTGACAGCATAGAGAATGGAAGCTTGAAGGATCATCTAAATGATCCCCTGAAGACACCCTTAAATTGGAGGACAAGGTTACAGATAGCTATTGATGTTGTGGCTGCCCTGGAATACTTGTTTCTCTTCGTTGAACAACCACTATGTCGTGTCTCCATCAGCTCTAGCAATATCATGTTTGATGATAATTTTACAGCTAAACTATCTGATTATGGTCTTCTTACTTGTGTTGGAAATCCTGTTATGATGACGAATTCAAAAGATGACAGCATGAGGCAGAAAAGTGGTAACATAATATACCAATTGGGAGTTTTCATACTGGAGCTTGTCACTGGTCAGTCTTCAGAGATGGAAGGTTCAGATCTAATAGAATGGATCCAGGAATCACGCTTCTACAGTTCCATTCATAACATGGTGGACCCTGATCTGGGCGACAATTACGATTCTAGGGAGTTAAAAACCCTTCTAGCTGTTGCAAAGTTATGTATCAAATCAAGGGACAAGCCTGTATTTACAATCCCCCAGTTATTTCGATATCTTCAGCACAAGGTGGATATTCCTCGTGACTAA 903 0.4164 MDPLIRKLRRRLLAWLRRSRSDRIHFMRRLSYKDVKRATDGFHRIIYSNSQVAAYAAKFEDGSASLVKEIKDFDQADDSFYSEVQFLGRLHHRHLLSLKGFSLNRKSRLLIFDSIENGSLKDHLNDPLKTPLNWRTRLQIAIDVVAALEYLFLFVEQPLCRVSISSSNIMFDDNFTAKLSDYGLLTCVGNPVMMTNSKDDSMRQKSGNIIYQLGVFILELVTGQSSEMEGSDLIEWIQESRFYSSIHNMVDPDLGDNYDSRELKTLLAVAKLCIKSRDKPVFTIPQLFRYLQHKVDIPRD 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03300 300 FunFam Protein kinase superfamily protein 16 113 - -
Accr1g03300 300 SMART tyrkin_6 24 288 IPR020635 GO:0004713|GO:0006468
Accr1g03300 300 PANTHER OS01G0253100 PROTEIN 25 295 - -
Accr1g03300 300 SUPERFAMILY Protein kinase-like (PK-like) 24 268 IPR011009 -
Accr1g03300 300 Gene3D Transferase(Phosphotransferase) domain 1 210 299 - -
Accr1g03300 300 ProSiteProfiles Protein kinase domain profile. 32 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g03300 300 Gene3D Phosphorylase Kinase; domain 1 12 113 - -
Accr1g03300 300 Pfam Protein tyrosine and serine/threonine kinase 63 191 IPR001245 GO:0004672|GO:0006468
Accr1g03300 300 FunFam probable receptor-like protein kinase At1g49730 210 299 - -
Accr1g03300 300 Gene3D Transferase(Phosphotransferase) domain 1 115 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03300 Accr-Chr1 69555509 69557879 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03300 28 296 Receptor kinase-like Gene Family AT3G19300 36.552 2.00e-58 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-1 Accr1g03300 PK_Tyr_Ser-Thr 2.3e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03300 - - gmx:100791979 405.986