Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03299 ATGCCCATGGATCCCTTGATCCGCAAGCTGCGCCGCCGCCTTCTTGCATGGCTTCGCCGATCTCGCTCTGATCGAATACACTTTATGAGGCGACTTTCATACAAGGATGTTAAAAGAGCAACGGATGGTTTTCACAGAATTATCTATAGCAATTCTCAAGTTGCTGCATATGCTGCCAAATTTGAAGATGGTAGCGCTTCTTTGGTGAAAGAAATAAAGGATTTTGATCAAGCAGATGACAGTTTCTACAGCGAAGTGCAATTCTTGGGCCGCTTGCATCATCGACACCTTTTGTCCCTCAAAGGATTTTCCTTGAATAGGAAGAGATTGCTCATTTTTGACAGCATAGAGAATGGAAGCTTGAAGGATCATCTAAATGATCCCCTGAAGACACCCTTAAATTGGAGGACAAGGTTACAGATAGCTATTGATGTTGTGGCTGCCCTGGAATACTTGTTTCTCTTCGTTGAACAACCACTATGTCGTGTCTCCATCAGCTCTAGCAATATCATGTTTGATGATAATTTTACAGCTAAACTATCTGATTATGGTCTTCTTACTTGTGTTGGAAATCCTGTTATGATGACGAATTCAAAAGATGACAGCATGAGGCAGAAAAGTGGTAACATAATATACCAATTGGGAGTTTTCATACTGGAGCTTGTCACTGGTCAGTCTTCAGAGATGGAAGGTTCAGATCTAATAGAATGGATCCAGGAATCACGCTTCTACAGTTCCATTCATAACATGGTGGACCCTGATCTGGGCGACAATTACGATTCTAGGGAGTTAAAAACCCTTCTAGCTGTTGCAAAGTTATGTATCAAATCAAGGGACAAGCCTGTATTTACAATCCCCCAGTTATTTCGATATCTTCAGCACAAGGTGGATATTCCTCGTGACTAA 906 0.4172 MPMDPLIRKLRRRLLAWLRRSRSDRIHFMRRLSYKDVKRATDGFHRIIYSNSQVAAYAAKFEDGSASLVKEIKDFDQADDSFYSEVQFLGRLHHRHLLSLKGFSLNRKRLLIFDSIENGSLKDHLNDPLKTPLNWRTRLQIAIDVVAALEYLFLFVEQPLCRVSISSSNIMFDDNFTAKLSDYGLLTCVGNPVMMTNSKDDSMRQKSGNIIYQLGVFILELVTGQSSEMEGSDLIEWIQESRFYSSIHNMVDPDLGDNYDSRELKTLLAVAKLCIKSRDKPVFTIPQLFRYLQHKVDIPRD 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03299 301 Gene3D Phosphorylase Kinase; domain 1 14 114 - -
Accr1g03299 301 PANTHER OS01G0253100 PROTEIN 27 296 - -
Accr1g03299 301 ProSiteProfiles Protein kinase domain profile. 34 301 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g03299 301 Gene3D Transferase(Phosphotransferase) domain 1 116 210 - -
Accr1g03299 301 Gene3D Transferase(Phosphotransferase) domain 1 211 300 - -
Accr1g03299 301 Pfam Protein tyrosine and serine/threonine kinase 66 192 IPR001245 GO:0004672|GO:0006468
Accr1g03299 301 FunFam probable receptor-like protein kinase At1g49730 211 300 - -
Accr1g03299 301 FunFam Protein kinase superfamily protein 18 114 - -
Accr1g03299 301 SUPERFAMILY Protein kinase-like (PK-like) 26 269 IPR011009 -
Accr1g03299 301 SMART tyrkin_6 26 289 IPR020635 GO:0004713|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03299 Accr-Chr1 69555503 69557879 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03299 30 297 Receptor kinase-like Gene Family AT3G19300 37.113 3.67e-57 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-1 Accr1g03299 PK_Tyr_Ser-Thr 1.6e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03299 - - gmx:100791979 407.912