Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03295 ATGTCAATGGATATGATGGCAACCGAACGTGTTTGTTATGTTCACTGCAACTTCTGCAACACCATCCTGGCGGTAAGTGTTCCATGCGGCAGTTTCCTTACCATAGTGACGGTTCGATGTGGGCATTGTGCTAATTTACTGTCAGTCAACATGGCAGCGTCTCTCCAAACATTCCCTTCTCAAGAGCTTCAGAAACAACACCTAAGCTATGAAGAATCAAGCAACAGAGAAGCGGGATCATCTTCAAAATGCAGTAAATTTGCTGCATTTGAGTCAGCAGAGCATGAACAACACAGGATTCCTCCCATTCGTCCCCCCGAGAAGAGACAACGAGTTCCTTCTGCTTATAACAGGTTCATCAAGGAGGAAATCCAAAGGATTAAGGCTAGTAATCCTGATATCAGCCACAGGGAAGCGTTTAGCACAGCGGCAAAAAATTGGGCACATTTTCCTCATATTCACTTTGGATTAAAGCTGGATGGCAACAAGGAAGAAAAGTTGGACCTGGAAGAGGGCACTCAAAAATCTAATAATGGCCTTTATTGA 546 0.4414 MSMDMMATERVCYVHCNFCNTILAVSVPCGSFLTIVTVRCGHCANLLSVNMAASLQTFPSQELQKQHLSYEESSNREAGSSSKCSKFAAFESAEHEQHRIPPIRPPEKRQRVPSAYNRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGLKLDGNKEEKLDLEEGTQKSNNGLY 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03295 181 CDD HMG-box_SF 111 147 - -
Accr1g03295 181 PANTHER PROTEIN YABBY 6-RELATED 1 167 IPR006780 GO:0007275
Accr1g03295 181 FunFam Axial regulator YABBY 102 174 - -
Accr1g03295 181 Pfam YABBY protein 7 157 IPR006780 GO:0007275
Accr1g03295 181 Gene3D High mobility group box domain 91 175 IPR036910 -
Accr1g03295 181 SUPERFAMILY HMG-box 101 150 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03295 Accr-Chr1 69530753 69536211 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03295 1 181 C2C2-YABBY Transcription Factor Family AT1G08465 63.441 2.18e-75 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Accr1g03295 YABBY 1.4e-71 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03295 K25796 - gmx:100500091 301.982