Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03294 ATGTCAATGGATATGATGGCAACCGAACGTGTTTGTTATGTTCACTGCAACTTCTGCAACACCATCCTGGCGGTAAGTGTTCCATGCGGCAGTTTCCTTACCATAGTGACGGTTCGATGTGGGCATTGTGCTAATTTACTGTCAGTCAACATGGCAGCGTCTCTCCAAACATTCCCTTCTCAAGAGCTTCAGTTACAGAAACAACACCTAAGCTATGAAGAATCAAGCAACAGAGAAGCGGGATCATCTTCAAAATGCAGTAAATTTGCTGCATTTGAGTCAGCAGAGCATGAACAACACAGGATTCCTCCCATTCGTCCCCCCGAGAAGAGACAACGAGTTCCTTCTGCTTATAACAGGTTCATCAAGGAGGAAATCCAAAGGATTAAGGCTAGTAATCCTGATATCAGCCACAGGGAAGCGTTTAGCACAGCGGCAAAAAATTGGGCACATTTTCCTCATATTCACTTTGGATTAAAGCTGGATGGCAACAAGGAAGAAAAGTTGGACCTGGAAGAGGGCACTCAAAAATCTAATAATGGCCTTTATTGA 552 0.4402 MSMDMMATERVCYVHCNFCNTILAVSVPCGSFLTIVTVRCGHCANLLSVNMAASLQTFPSQELQLQKQHLSYEESSNREAGSSSKCSKFAAFESAEHEQHRIPPIRPPEKRQRVPSAYNRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGLKLDGNKEEKLDLEEGTQKSNNGLY 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03294 183 CDD HMG-box_SF 113 149 - -
Accr1g03294 183 PANTHER PROTEIN YABBY 6-RELATED 1 169 IPR006780 GO:0007275
Accr1g03294 183 FunFam Axial regulator YABBY 104 176 - -
Accr1g03294 183 SUPERFAMILY HMG-box 103 152 IPR036910 -
Accr1g03294 183 Gene3D High mobility group box domain 93 176 IPR036910 -
Accr1g03294 183 Pfam YABBY protein 7 159 IPR006780 GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03294 Accr-Chr1 69530753 69536211 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03294 1 183 C2C2-YABBY Transcription Factor Family AT1G08465 63.298 1.13e-76 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Accr1g03294 YABBY 3.2e-72 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03294 K25796 - gmx:100785458 303.908