Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03292 ATGGAGGGTCCGGAGTCGGAAGAGAATAAGAAGTCTGAAGTGCATTTGACTTCCGCTGCAGCCTTTGTGGAGGGTGGAATCCAGGATGCTTGTGATGATGCTTGTAGCATATGTCTCGAAGCATTTCATGAAAGCGATCCTTCAACAGTGACAAGTTGCAAGCATGAGTTTCATCTTCAATGCATTCTAGAATGGTGTCAAAGAAGCCCTCAATGCCCCATGTGTTGGCAACCCATCAGTTTCAAAGATCCATCGAGTCAGGAATTACTTGAAGCTGTGGAAAAAGAGAGAAACATTAGGTTGAATCCACCAAGAAATGCCACGATATTTCATCATCCAGCTCTGGGGGATTTTGAGTTACAACATTTGCCTGTTGGTGCAAATGATGCTGATCTTGAAGAGCGTATCATACAGCACTTAGCTGCTGCTGCAATGGGACGTGCTCGCCATATTGCTAGAAGGGAAGGTCAGAGAAACAGGTCATCAGCTCAAGGTCGCCCACAATTTTTGGTATTTTCAACCCATCCTAATTCACCTCCCATGGGTCCTGCCTCTCCAACTCATGGGGCAAACGGTGAACCAGCTTCAGCAATCACTGTTGCTACTCTACCTCAGACTCCTGCCACTGGGGAAGAATCATCACAGTCAACTTCTGTTCCTCTTGTTCAAGCAGACCATATTTCTGCTTCAGGATCAGGATCAGGATCTACTGCTCTTGCTGCTGATAACCATGGATCATCTTACAACAATAGGAGATCACCTAGCCAGTCTTCTCCAAGCAGTCAGGATAGAGCAGGGCCATCGGAATTTCAATCATTTTCAGAATCTTTAAAGTCTAGATTTAATGCAGTTTCAACGAGATACAAAGAGTCGATATCCAGGAGCACCAGAGGTTGGAAGGAGAGATGGTTCTCTCGCAACAGCTCTATGCCTAATGTGGGATCCGAAGGCAGACAAGAGGTTAATGCTGGCATTGCAACTGTGTCACGCATGATGGAAGGACTTGATACCAGAGACAACAACAGAAATGATAGTAATCCTTCTCAAAGTCATCTAGAAGGTGGTTCGGTTGCTCATGATAGCAATCCTTCTCAAAGTCATTTAGAAGGTGGTTCGGTTGCTAATGACAGCAATCCTTCTCAAAGTCATTTAGAAGGTGGTTCGGTTGCTAATGACAGCAACTCTTCTCAAAGTCATTTAGAAGGTGGTTTGGTTGCTGGATCAAATGACCAACATATTTCAGATGCTGAAGGTGAAGGTGCATCAAGAGATTGTGACACAAAAACATCCTTTGCAGCAGGTTCTAGTTCGAATTAA 1317 0.4465 MEGPESEENKKSEVHLTSAAAFVEGGIQDACDDACSICLEAFHESDPSTVTSCKHEFHLQCILEWCQRSPQCPMCWQPISFKDPSSQELLEAVEKERNIRLNPPRNATIFHHPALGDFELQHLPVGANDADLEERIIQHLAAAAMGRARHIARREGQRNRSSAQGRPQFLVFSTHPNSPPMGPASPTHGANGEPASAITVATLPQTPATGEESSQSTSVPLVQADHISASGSGSGSTALAADNHGSSYNNRRSPSQSSPSSQDRAGPSEFQSFSESLKSRFNAVSTRYKESISRSTRGWKERWFSRNSSMPNVGSEGRQEVNAGIATVSRMMEGLDTRDNNRNDSNPSQSHLEGGSVAHDSNPSQSHLEGGSVANDSNPSQSHLEGGSVANDSNSSQSHLEGGLVAGSNDQHISDAEGEGASRDCDTKTSFAAGSSSN 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03292 438 MobiDBLite consensus disorder prediction 336 438 - -
Accr1g03292 438 SMART ring_2 35 75 IPR001841 -
Accr1g03292 438 FunFam E3 ubiquitin-protein ligase RHF2A 6 109 - -
Accr1g03292 438 MobiDBLite consensus disorder prediction 341 404 - -
Accr1g03292 438 MobiDBLite consensus disorder prediction 149 194 - -
Accr1g03292 438 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 11 84 - -
Accr1g03292 438 MobiDBLite consensus disorder prediction 226 276 - -
Accr1g03292 438 ProSiteProfiles Zinc finger RING-type profile. 35 75 IPR001841 -
Accr1g03292 438 MobiDBLite consensus disorder prediction 161 175 - -
Accr1g03292 438 Pfam Ring finger domain 34 75 IPR001841 -
Accr1g03292 438 SUPERFAMILY RING/U-box 28 82 - -
Accr1g03292 438 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 10 84 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03292 Accr-Chr1 69505975 69510131 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03292 32 83 C3H Transcription Factor Family AT4G00335 46.154 2.31e-12 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03292 K19043 - gmx:100814908 545.814