Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03267 ATGAAGGACTTTATGGCTGTGACTCGAACAATTTGGATTTGGACGATACTCTGTGGTCTTGCTCGTTGCCAAAGGCCAGCGTCTGTGAATATTGGCGCGGTTTTCACATTTGATTCGGTCATAGGTAAAGTTGCGAAGGTGGCGGTGAAAATGGCCGTCGACGACGTCAATGCAGACCCTCTAGTTCTTAATGGGACGAAACTGAACTTGATAATGGAGGATGCCAGTTGCAACGTCTTCCTGGGATCGATAGGAGCGTTCCGTGCACTTGAGCAGGGGGTTGCGGCCATCATTGGTCCACAATCATCTTCCATCGCTCACGCGATTTCTCAAATTACTGATGGACTTCAAGTGCCTCAAGTTTCCTATGCTGCCACTGATCCAACCCTGTCTTCCCTCCAGTTTCCTTTCTTTTTTCGTTCCATACCAAGTGATTCTGAGCAAATGGCTGCAGTGGCTGATTTAATTGAATTCTATGGATGGAAAGAGGTCATTTCCGTCTACTTGGATGATGATTATGGGAGAAATGGAATATCTTCTCTGGATGATGAACTTGAAAAAAGGAGGATAAGGATGCCTCATAAGTTGCCTATTAGCATCAAGTTTGATCTGAATGAAATCACTAACTTACTCAATCACTCCAAAGTGTTTGGTCCTCGTGTGTATGTTGTTCACGTCAACCCAGATCCTAGATTAAGGATTTTCAGCATAGCCTACAAACTGAAGATGATGTCTAGTGAATTTGTCTGGCTTGCCACTGATTCCCTCTCTGCTACTCTAGACTCGTTCACCCCACAGAATCATTCCTCTCTCAGTGTTGTGCAAGGGGTGGTTGCACTTCGTCCTCACATTCCTGATTCTCCCAAGAAAAGATCTTTTGTTTCTCAGTGGACAAAAATGCAGAATGAAAGCACAGCAAGCATTGGGTTAAACCATTATGGATTTTTTGCGTACGATACAATTTGGGCTGTTGCGCGTTCAATTGACAAGTTTATTGAAATACACAAGAATATTACACTCTCAGTCAATAATAACTCGGGGCTACTGAATACAGAAGCAGCTAATATGCTGCTTGACAAGCTCAAAGTCTTCACAGGTGGATCTGATCTGATCAACATATTATTGCAATCAAATTATACTGGTGTGAGTGGTCGCTTTCAGTTTAGTCCAGACAGGAATATTGTTAGTGGTGGCTATGAAATTATCAATATCAACCAGACCGAGATTACGAGGGTTGGATATTGGTCTAATGATTCTGGACTTTCAGTGGCACCACCTGAAACTCTTAAGAAGAAAGGACATGGCAGGGTTCCCCAAGATCAGAAGCTTAACAAGATCACTTGGCCAGGTGGAATGACAGGAAGACCACGTGGCTGGGTGATTGCTGATCATGCAAGGCCACTGAGAATTGGAGTTCCCAAGAGAGCAAGTTTTGTTGAGTTTGTCACTGAGCTTCCTGGTAGTCATCAGATTCAAGGTTACTGCATTGATATTTTCAAGAAAGCACTGGAGTTTGTACCATATGATGTTCCTTATGTATTTATGCCTTTCGGGAATGGTCAGTCAAATCCCAATTATGATGCGCTTGTGAATATGGTTGCTGACAATGTATTTGATGCGGTTGTTGGAGACATAGCAATTGTGACAAACCGTACACGTGTTGCGGATTTTTCTCAGCCTTTCACATCAACTGGTCTTGTTATAGTGGCTCCAATCAAGTATTCAAAATCAAGTGCTTGGGTTTTTCTCAAACCGTTTACACCAGATCTGTGGTGTGTCACCGCAGCTTCATTTATAATGATTGGGGTAGTTATATGGATTCTTGAGCACCGAATCAATGATGATTTCCGCGGTCCTCCTAAGAGGCAAATTGTGACGATGTGTATGTTCAGCTTCTCAACCCTGTTTAAGACAAATCAGGAAAACACATTAAGCACACTGAGTCGAATGGTGATGATTGTATGGCTTTTTCTGCTGATGGTGATCACGGCTAGCTATACAGCAAACCTGACTTCAATTCTTACAGTGGAGCAGCTTTCATCACCCATCACCGGCATTGATAGCTTGATTGCGACTAACTGGCCTATAGGGTACCAAGTAGGGTCATTTGCTTTCAACTATCTGAGACAGAACTTTAATGTACCAAAATCAAGACTTGTTGCTCTGGGTAACCCTGAGGAATATGCAAGAGCTCTGCAGCTAGGGCCTTCTCGTGGAGGGGTGGCAGCTATCGTTGATGAGCTTCCGTACATAGAGTTATTTCTGTCAACACAAACTGATTTTGGCATTATTGGACAACAATTTACCAAAAGCAGTTGGGGATTTGCATTTCGAAGAGAGTCTCCTCTGGCTTTTGATATGTCTACAGCAATACTGAAACTAAGTGAGGACGGAGAGCTTCGGAGGATCCGAGAGCGGTGGTTCTGTAAGATGGGTTGTCCTGAAGAAAGAAAAAGCGACTCAGAGCCTAACCGACTTCACTTGACAAGCTTCTGGGGTCTATACCTTACATGTGGTGTTGTCACTCTCGCTTCTTTCCTGGTGTTTCTGCTCCGAACAATTTGCCAATACATGAGATACAAGCAAAGGCAAAAAGATATTCCTTCTGGATCCCGTGAGGCATCATCTAGTGGTAAATGTTCCCACGTTATCTATAGCTTTTTTAATTTCATTGATGAGAAGGAAGAAGCCATCAAGAAAATGTTCACTCACTGTGAGAATCCAGAGCAGCAGCCCACCTGA 2742 0.4336 MKDFMAVTRTIWIWTILCGLARCQRPASVNIGAVFTFDSVIGKVAKVAVKMAVDDVNADPLVLNGTKLNLIMEDASCNVFLGSIGAFRALEQGVAAIIGPQSSSIAHAISQITDGLQVPQVSYAATDPTLSSLQFPFFFRSIPSDSEQMAAVADLIEFYGWKEVISVYLDDDYGRNGISSLDDELEKRRIRMPHKLPISIKFDLNEITNLLNHSKVFGPRVYVVHVNPDPRLRIFSIAYKLKMMSSEFVWLATDSLSATLDSFTPQNHSSLSVVQGVVALRPHIPDSPKKRSFVSQWTKMQNESTASIGLNHYGFFAYDTIWAVARSIDKFIEIHKNITLSVNNNSGLLNTEAANMLLDKLKVFTGGSDLINILLQSNYTGVSGRFQFSPDRNIVSGGYEIININQTEITRVGYWSNDSGLSVAPPETLKKKGHGRVPQDQKLNKITWPGGMTGRPRGWVIADHARPLRIGVPKRASFVEFVTELPGSHQIQGYCIDIFKKALEFVPYDVPYVFMPFGNGQSNPNYDALVNMVADNVFDAVVGDIAIVTNRTRVADFSQPFTSTGLVIVAPIKYSKSSAWVFLKPFTPDLWCVTAASFIMIGVVIWILEHRINDDFRGPPKRQIVTMCMFSFSTLFKTNQENTLSTLSRMVMIVWLFLLMVITASYTANLTSILTVEQLSSPITGIDSLIATNWPIGYQVGSFAFNYLRQNFNVPKSRLVALGNPEEYARALQLGPSRGGVAAIVDELPYIELFLSTQTDFGIIGQQFTKSSWGFAFRRESPLAFDMSTAILKLSEDGELRRIRERWFCKMGCPEERKSDSEPNRLHLTSFWGLYLTCGVVTLASFLVFLLRTICQYMRYKQRQKDIPSGSREASSSGKCSHVIYSFFNFIDEKEEAIKKMFTHCENPEQQPT 913
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03267 913 SUPERFAMILY Periplasmic binding protein-like I 23 460 IPR028082 -
Accr1g03267 913 PIRSF IGluLR_plant 1 913 IPR017103 -
Accr1g03267 913 Gene3D - 464 579 - -
Accr1g03267 913 CDD GluR_Plant 466 808 - -
Accr1g03267 913 Gene3D - 580 711 - -
Accr1g03267 913 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 29 868 IPR015683 -
Accr1g03267 913 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 102 130 - -
Accr1g03267 913 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 317 329 - -
Accr1g03267 913 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 42 58 - -
Accr1g03267 913 FunFam Glutamate receptor 579 716 - -
Accr1g03267 913 FunFam Glutamate receptor 144 310 - -
Accr1g03267 913 FunFam Glutamate receptor 705 812 - -
Accr1g03267 913 CDD PBP1_GABAb_receptor_plant 30 425 IPR044440 -
Accr1g03267 913 Pfam Bacterial extracellular solute-binding proteins, family 3 469 808 IPR001638 -
Accr1g03267 913 Pfam Receptor family ligand binding region 47 406 IPR001828 -
Accr1g03267 913 Gene3D - 756 815 - -
Accr1g03267 913 FunFam Glutamate receptor 463 579 - -
Accr1g03267 913 SMART GluR_14 467 810 IPR001320 GO:0015276|GO:0016020
Accr1g03267 913 SUPERFAMILY Periplasmic binding protein-like II 446 808 - -
Accr1g03267 913 Gene3D - 144 421 - -
Accr1g03267 913 Gene3D - 47 396 - -
Accr1g03267 913 Pfam Ligand-gated ion channel 809 840 IPR001320 GO:0015276|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03267 Accr-Chr1 69295949 69299985 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03267 6 913 Ion Channels AT2G32400 55.482 0.0 1022
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03267 K05387 - gmx:100784247 1333.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr13g00564 13 6110086 6114846 Accr1g03267 1 69295949 69299985 CCT
Accr1g03267 1 69295949 69299985 Accr1g03267 1 69295949 69299985 ECH