Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03266 ATGGCTGTGGCTCCAACGTTATTCCTCCTGTTTTTCTGGTTATGGATTCCCACAGAAGCTGTGGGTAGGACAGGAAATAGTACCATGACAAATAGTACAGTTTCTTCAAAACCGAATGTTGTGAGAATTGGAGTCCTGTTTACGTTTGATTCGGTCATTGGAAGATCTGCTAAACCTGCAATTTCGGCTGCTGCTGATGATGTTAATTCTGATACAAGCATTCTCAGCGGGATAAAGCTGGAAATTATTTTACATGATACCAACTGCAGTGGATTTCTTGGAATAGTAGAAGCTTTGCAGCTAATGGAAAATGATGTGGTTGCCGTGATCGGTCCACAGTCCTCTGGGATAGGTCATGTGATTTCTCATGTTGTTAACGAGCTTCATTTACCTCTTCTCTCATTTGGGGCAACAGATCCTACTCTTTCTTCTCTGCAGTACCCTTATTTCGTCCGCACTACGCAAAATGATCACTTCCAAATGTATGCAGTTGCAGACTTGATTCGTTACTATGGATGGAGCGAGGTAATAGCAATTTTTGTGGATGATGATAATGGAAGAAATGGAATTTCTGTACTGGGCGATGCGCTTGCACATAAACGTGCCAGGATCTCCTATAAGGCCGCCTTCCCTCCAGATGCTTCCAAAACTGCCATAAATGACCTGTTAAATGAGGTGAATTTAATGGAATCACGGATCTATGTTCTGCATGTGAATCCTGATTCAGGTCTGGAAATTTTCTCTCTTGCAAGAAAGCTTGGGATGATGACCAATGGCTATGTCTGGATTGCAACTGATTGGCTTCCTTCAGTGCTTGATTCACAAGCACCAGCTAGCCTTGACACCTTGAATCTTTTACAAGGGGTTCTTGCATTTCGTCACCACACTCCTTATACTGATAGGAAAAATAATCTTCTCTCTAGGTTGAAGAAATTGAACAACACTAAGACTTCAGGCTTCAATTCTTATGCTTTGTATGCTTATGATTCTATCATGCTAGCTGCCCGTGCTTTGCATGAATTTCTCAATCATGGTGGAACCATTTCTTTCTCCAATGACCCTAACTTGCATGAAACTAATCGAAGTATGTTGCATTTATCGTCGCTTCGAGCTTTCAATGATGGCCCCAAGTTTCTCCAGACAATCCTGGGAATGAATTTCACCGGTGTTAGCGGTCAGATTCAGTTTGACAAGGACAAGAATTTGATTCGACAAGCATACGATATTGTAAACATTGGTGCATCTGGACCTCGTATTGTTGGTTACTGGTCTAATCACTCTGGTCTTTCAGATGTAGTTCCTGAAGTCTTGTACTCAAAATCGCCTAACAAGTCTACTGGCAATAAGCATCTGTCCAATGTCATATGGCCAGGACTGACTTCAATTACACCCAGAGGATGGGTATTCCCCAATAATGGAAGGCCACTGAGAATTGCAGTGCCAAATCGAGTAAGCTTTAGGGAGTTTGTTGGCAAAGACAAGGACCCTCCTGGGGTGAAAGGTTTTTGCATCGATGTCTTTGAAGCAGCGTTAAATTTAGTGCCTTATCCTGTCCCCAGGAAGTATATACTATACGGACACGGTGATAGAAATCCTAACTATGATGAGCTTGTGAATCAGGTCGCACAAAATAATTTTGATGCTGCTGTTGGGGATGTTACTATTGTCACAAACAGGACAAGGATTGTGGATTTCACTCAACCTTTCATGACTTCAGGGCTGGTTGTAGTTGTTCCTGTTAAAGAGGTAAAGTCAAGCCCCTGGTCTTTCCTTAAGCCATTTACTGCAGAAATGTGGTTTGTCACTGGTGCCTTTTTTCTTTTCGTGGGAGCTGTTGTGTGGATTCTTGAACATCGGCACAATCATGAGTTCCGAGGACGACCCAGGAAACAACTTATGACAATTTTTTGGTTTAGCTTCTCAACAATGTTCTTCTCACACAGAGAGAACACAGTGAGTAGTCTAGGGAGATTGGTGCTGATCATTTGGCTATTTGTGGTGCTAATTATCAATTCAAGCTACACAGCTAGCTTGACATCCATACTCACGGTGCAGCAACTTTCATCACAAATTGAAGGCATTGACAGTCTCACCTCAAGCACTCAACCAATCGGAGTTCAAGACGGGTCATTTGCCCGAAAGTATCTCATAGATGAGCTCAACATAGCCGAATCAAGAGTAGTCATGTTGAAAAATACGCAGGACTATATTGATGCCCTGACACGTGGACCCAGAAATGGAGGTGTGGTAGCCGTTGTGGATGAGCTTCCTTATATTGAGCTTCTCATGTCCAGCACCAATTGTCGGTTCAGAACCGTAGGCCAAGAATTCACAAAGAGTGGATGGGGATTTGCATTTCAGAGGGACTCTCCACTGGCGGTGGACATGTCAACGGCAATTCTGCAACTATCAGAGAATGGTGACCTGCAGAAGATTCATGACAAATGGTTGTTAAAGGAAGAATGTTCAGCAAAACAAAACGATGATGCAGAATCAAACCAGCTATCACTGAGTAGCTTCTGGGGGTTGTTCCTCATAAGTGGGGTGGCGTGTCTGCTTGCTTTGATTGCCTTCTGCATAAGGGTGTGTTGGCAGTTCGCAAAATTCGAGCCGGACATGGGTGAAGAGATCGACCACGAAATTCTGCAACAGCGCATGCCCAAGCCTAAACGCCCATGTCGTCGCACTCCGAGCTTCAAGGACCTGATGAATTTCGCTGATGAAAAAGAAGCTGTAATCAAAGAGCGTCTCAGAAAAAAGAATAATAAACGTCCACGCTCCCAAAGCTTATTATTAGAGTAA 2802 0.4336 MAVAPTLFLLFFWLWIPTEAVGRTGNSTMTNSTVSSKPNVVRIGVLFTFDSVIGRSAKPAISAAADDVNSDTSILSGIKLEIILHDTNCSGFLGIVEALQLMENDVVAVIGPQSSGIGHVISHVVNELHLPLLSFGATDPTLSSLQYPYFVRTTQNDHFQMYAVADLIRYYGWSEVIAIFVDDDNGRNGISVLGDALAHKRARISYKAAFPPDASKTAINDLLNEVNLMESRIYVLHVNPDSGLEIFSLARKLGMMTNGYVWIATDWLPSVLDSQAPASLDTLNLLQGVLAFRHHTPYTDRKNNLLSRLKKLNNTKTSGFNSYALYAYDSIMLAARALHEFLNHGGTISFSNDPNLHETNRSMLHLSSLRAFNDGPKFLQTILGMNFTGVSGQIQFDKDKNLIRQAYDIVNIGASGPRIVGYWSNHSGLSDVVPEVLYSKSPNKSTGNKHLSNVIWPGLTSITPRGWVFPNNGRPLRIAVPNRVSFREFVGKDKDPPGVKGFCIDVFEAALNLVPYPVPRKYILYGHGDRNPNYDELVNQVAQNNFDAAVGDVTIVTNRTRIVDFTQPFMTSGLVVVVPVKEVKSSPWSFLKPFTAEMWFVTGAFFLFVGAVVWILEHRHNHEFRGRPRKQLMTIFWFSFSTMFFSHRENTVSSLGRLVLIIWLFVVLIINSSYTASLTSILTVQQLSSQIEGIDSLTSSTQPIGVQDGSFARKYLIDELNIAESRVVMLKNTQDYIDALTRGPRNGGVVAVVDELPYIELLMSSTNCRFRTVGQEFTKSGWGFAFQRDSPLAVDMSTAILQLSENGDLQKIHDKWLLKEECSAKQNDDAESNQLSLSSFWGLFLISGVACLLALIAFCIRVCWQFAKFEPDMGEEIDHEILQQRMPKPKRPCRRTPSFKDLMNFADEKEAVIKERLRKKNNKRPRSQSLLLE 933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03266 933 Pfam Ligand-gated ion channel 819 851 IPR001320 GO:0015276|GO:0016020
Accr1g03266 933 Pfam Receptor family ligand binding region 58 412 IPR001828 -
Accr1g03266 933 Pfam Bacterial extracellular solute-binding proteins, family 3 531 818 IPR001638 -
Accr1g03266 933 SUPERFAMILY Periplasmic binding protein-like II 453 819 - -
Accr1g03266 933 PIRSF IGluLR_plant 1 931 IPR017103 -
Accr1g03266 933 FunFam Glutamate receptor 587 717 - -
Accr1g03266 933 SMART GluR_14 477 819 IPR001320 GO:0015276|GO:0016020
Accr1g03266 933 Gene3D - 156 429 - -
Accr1g03266 933 Gene3D - 60 405 - -
Accr1g03266 933 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 54 70 - -
Accr1g03266 933 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 114 142 - -
Accr1g03266 933 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 245 268 - -
Accr1g03266 933 Gene3D - 471 586 - -
Accr1g03266 933 CDD PBP1_GABAb_receptor_plant 42 432 IPR044440 -
Accr1g03266 933 CDD GluR_Plant 474 817 - -
Accr1g03266 933 Gene3D - 711 821 - -
Accr1g03266 933 FunFam Glutamate receptor 471 587 - -
Accr1g03266 933 Gene3D - 587 710 - -
Accr1g03266 933 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 41 894 IPR015683 -
Accr1g03266 933 FunFam Glutamate receptor 713 821 - -
Accr1g03266 933 FunFam Glutamate receptor 156 326 - -
Accr1g03266 933 SUPERFAMILY Periplasmic binding protein-like I 36 467 IPR028082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03266 Accr-Chr1 69289409 69293017 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03266 37 784 Ion Channels AT1G05200 68.850 0.0 1102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03266 K05387 - qsa:O6P43_000581 1356.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g03266 1 69289409 69293017 Accr13g00564 13 6110086 6114846 CCT
Accr1g03266 1 69289409 69293017 Accr1g03266 1 69289409 69293017 ECH