Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03262 ATGCCTGCCGGCATGATGATTCCGGCCAGAAATATGACCTCGGTGATTGGAAGGACCGGCAACGTTGGTGCGTTTGGATCATCCTCAGGTCTCACTCTCAGCCAGCCAAACATGATGGAAGGTCATCAGCTGCTCCCACTGGACATGGCTCCCAACACCTCCGAGAGCGATGTCGTCCCCCGCATCCGAGACGACGACTTTGACAGTGCCACCAAGTCCGGCAGTGAAAACCAGGAAGCCGCCTCCGGCGACGACCACAATCCCCGCCCCAATAAGAAGAAGCGCTACCACCGCCACACCCAGCACCAGATCCAGGAGATGGAAGCTTTCTTTAAGGAGTGCCCGCATCCAGATGACAAGCAGAGAAAGGAACTGAGCCGGGAATTAGGGTTAGAGCCATTGCAGATCAAGTTTTGGTTTCAAAACAAGCGAACTCAGATGAAGACCCAACATGAGCGGCAAGAGAACTCACAACTTAGAGCCGAGAATGAGAAGCTTAGAGCAGACAACATGAGGTATAGGGAAGCTCTTAGCAATGCCTCATGTCCAAACTGCGGTGGACCAACTGCTATAGGTGAAATGTCTTTTGATGAGCATCATTTGAGAATGGAAAATGCTCGCCTACGAGAAGAGATTGATAGGATATCAGCAATTGCTGCAAAGTACGTGGGGAAGCCAGTGGTGAACTATCCACTGCTTTCCCCAGCAAGTATTCCTGCGCGGCCACTGGAACTGGGTGGTTTTGGTGGGGATGTATATGGAGGTGGAGATGTTGTTAGGTCTATGAGTGGGCCCAGCGAAGCTGATAAGCCCATGATAATAGAGCTGGCTGTGGCTGCCATGGAAGAGCTTGTGAGGATGGCTCAAATGGGTGACCCCTTATGGATGACCACTCTTGATGGAACTTCCTCTGTGCTTAGCGAAGACGAATATATCAGAAGTTTCCCTCGCGGGATTGGTCCAAAACCTGCTGGGTTCAAGTGTGAAGCTTCACGAGAAACTGCTGTTGTCATCATGAACCATATTAGTCTTGTTGAGATTCTCATGGATGTGAATCAATGGACCACAGTGTTCTCGGGTATAGTCTCAAGAGCGATGACTCTGGAAGTATTATCAACAGGGGTGGCTGGGAACTACAATGGAGCCCTGCAAGTGATGACGGCAGAGCTACAAGTACCTACACCTCTAGTGCCAACTCGAGAGAGTTATTTTGTAAGATACTGCAAACATCACGGGGAAGGGACATGGGCAGTGGTGGATGTGTCGCTGGATAATTTGCGGCCTAGTCCTTCTGTTAGATGTAGAAGAAGACCTTCCGGTTGCTTAATTCATGAAATGCCTAATGGCTACTCCAAGGTGACGTGGGTTGAGCATGTGGAGGTGGACGACAGAGGAGTTCATGATCTATACAAGCAGCTCGTGAGCTGTGGACATGCTTTTGGGGCAAAACGTTGGGTGGCTACCTTGGATCGACAATGTGAAAGGCTTGCTAGTTCCATGGCTACCAATATTCCTACCGGTGATGTTGGAGTTATAACCAATCAAGAAGGGAGGAAGAGTATGCTGAAACTGGCGGAGAGAATGGTGATGAGTTTTTGTGCCGGGGTAAGCGCTTCTACTGCTCACACGTGGACTACACTATCCGGTACTGGGGCTGACGACGTGCGGGTCATGACCCGTAAGAGTGTGGATGACCCGGGAAGGCCTCCTGGCATTGTTCTGAGCGCTGCAACTTCTTTTTGGCTTCCAGTTCCTCCTAACAGAGTTTTTGATTTCCTGCGTGATGAGAATTCCAGAAATGAGTGGGATATTCTTTCGAATGGTGGAGTAGTCCAAGAAATGGCACATATAGCTAATGGCCAGGACACAGGGAATTGTGTCTCTCTACTTCGAGTAAATAGTGCGAATTCAAGCCAAAGCAACATGTTAATACTGCAAGAAAGCTGCAGAGACACGACGGGGTCGTTTGTGGTATATGCACCAGTGGATATAGCTGCAATGAACTTGGTTCTAAATGGAGGGGATCCTGACTACGTGGCCCTTCTTCCTTCTGGATTTGCCATACTGCCAGATGGAGCCACGGCACATAATGGTGGATCTCTCTTAACTGTTGCATTCCAAATTTTGGTGGACTCAGTTCCCACAGCCAAACTATCTCTTGGATCTGTTGCCACTGTCAATAATCTCATTGCCTGCACTGTTGAGAGAATTAAGGCCTCTTTATCCTGTGAACCTGCTGCCTAA 2244 0.4933 MPAGMMIPARNMTSVIGRTGNVGAFGSSSGLTLSQPNMMEGHQLLPLDMAPNTSESDVVPRIRDDDFDSATKSGSENQEAASGDDHNPRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQIKFWFQNKRTQMKTQHERQENSQLRAENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRMENARLREEIDRISAIAAKYVGKPVVNYPLLSPASIPARPLELGGFGGDVYGGGDVVRSMSGPSEADKPMIIELAVAAMEELVRMAQMGDPLWMTTLDGTSSVLSEDEYIRSFPRGIGPKPAGFKCEASRETAVVIMNHISLVEILMDVNQWTTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAELQVPTPLVPTRESYFVRYCKHHGEGTWAVVDVSLDNLRPSPSVRCRRRPSGCLIHEMPNGYSKVTWVEHVEVDDRGVHDLYKQLVSCGHAFGAKRWVATLDRQCERLASSMATNIPTGDVGVITNQEGRKSMLKLAERMVMSFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPNRVFDFLRDENSRNEWDILSNGGVVQEMAHIANGQDTGNCVSLLRVNSANSSQSNMLILQESCRDTTGSFVVYAPVDIAAMNLVLNGGDPDYVALLPSGFAILPDGATAHNGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCEPAA 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03262 747 FunFam Homeobox-leucine zipper protein HDG1 78 166 - -
Accr1g03262 747 SUPERFAMILY Bet v1-like 268 497 - -
Accr1g03262 747 Gene3D - 78 167 - -
Accr1g03262 747 Pfam START domain 276 495 IPR002913 GO:0008289
Accr1g03262 747 ProSiteProfiles START domain profile. 266 498 IPR002913 GO:0008289
Accr1g03262 747 MobiDBLite consensus disorder prediction 58 72 - -
Accr1g03262 747 MobiDBLite consensus disorder prediction 47 101 - -
Accr1g03262 747 Gene3D - 329 479 IPR023393 -
Accr1g03262 747 ProSitePatterns 'Homeobox' domain signature. 125 148 IPR017970 GO:0000981|GO:0006355
Accr1g03262 747 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 91 741 IPR042160 -
Accr1g03262 747 Pfam Homeodomain 93 148 IPR001356 GO:0003677
Accr1g03262 747 CDD START_ArGLABRA2_like 270 494 - -
Accr1g03262 747 SMART HOX_1 91 154 IPR001356 GO:0003677
Accr1g03262 747 ProSiteProfiles 'Homeobox' domain profile. 90 150 IPR001356 GO:0003677
Accr1g03262 747 SMART START_1 275 495 IPR002913 GO:0008289
Accr1g03262 747 FunFam Homeobox-leucine zipper protein GLABRA 2 275 494 - -
Accr1g03262 747 SUPERFAMILY Homeodomain-like 82 150 IPR009057 -
Accr1g03262 747 SUPERFAMILY Bet v1-like 514 738 - -
Accr1g03262 747 CDD homeodomain 93 151 IPR001356 GO:0003677
Accr1g03262 747 Coils Coil 149 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03262 Accr-Chr1 69272161 69275879 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03262 62 746 Homeobox Transcription Factor Family AT1G05230 81.034 0.0 1158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Accr1g03262 START 1e-57 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03262 K09338 - gmx:100797992 1306.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g03262 1 69272161 69275879 Accr13g00570 13 6174637 6178452 CCT
Accr1g03262 1 69272161 69275879 Accr1g03262 1 69272161 69275879 ECH