Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03252 ATGGTCGAAAGGAAGCAGTTCAAGACCAGGCTATGCGTGCCGTATCAGAAAGGCCGCTGTCCACGCCAAAATTGCACCTTTGCTCATGGGAATGCTGAGCTGCGGCGATTCTCTGGCTCATATAGTAGGCAAGACTATTCAGGTAGTGACTTGAGAGGAAAACTTGAAAGAAGGCATTTATCACCTCGCAGGTTATCACCGGCAAGAGATGCAAGGAGCCACCATAACATTCATGATTACAGCCCTGGGAGGTCCTTCGAGAAAAGAAGTGATAGGAAGCGCAAGAGAGACAAGGGCATTGCAGGTCAAAGTGATGTTTCTGGAGGCTTGAGATTCTCTGATAGAATCCAAGATAAAGTTAGAGAAGGAAAACTACATTCCTCTGGTTCAAAAAATAGTCTCGAGGAGCAGCTGAAGAAAGTACAGTCGGAAGTCAACATGCTTGACCAGCAAAAGTATCAGCTTGAGGTCTACTTGGATGAGAGTGTTCAAGAAGTGGATAGCCTTAATTCGAGAATTCAGGAACTTGAGGCTCAATTATATAAAGAGAATGAAGAATGTAAAAGGGTCTCATCAAAACTGAGGAAGTTTATCAAAGCGCACAATCATAACACCCGATTACAAGATGAATTAAAGAGATCACAGGCTCGACTTCAAAGGTTGGGAGATCAGCTTGACTCGGACATTGCCAGAATTGGTGTCAATGAAGAAGACATGAGCATTGATATTGTAAGCAATGCTGAGGACGTAGGTTTTCCACCCATCACCAAAGATAATGTGGAGCGGAATGATGCTTCCCCTCACAGGAAAAGGCTGCCTGTTGGCCATGATGCTGTTGAAGATACAAAACAAGTCGGGTGTTTGGTTGGAACAGCCAGAACCAGGAAGCGTTCTCGGTGGAATTTGGCTGCTGAGTCAAACGATAAGGGTGATGAAGGCCCTGTGGCTGCAGATAATGGGACTCAAGTGACCAAGTCCCTTAATATTGAAGGCAGGCCAAAAAAAGGAACGCCTAGTTCTTCTGGCAACCTCGGCTTAGAAAAGTTGAAGGACAGTAGGGCTGGTGTGCCATTAACCAGCATGGCTGCTCATGTGGCTGATGAGGAAGTTGACATTGAGCTTGATGATAACATTGACAAAACTGAAACTGCTCCCTCAGAAATTGAGAACGAAGTGGCATTTAAGGCGGGGAGTTTTCCACCACTTCCGCCAACTCTGACTTCTTCTGGAACGAACTATTCACAGTATGAGGGTGATGATGAGAATGTGGATGTGGATGGGCTTGATGAAGAGGCAGCAATTACACGCATGGATACAGTCTAA 1323 0.455 MVERKQFKTRLCVPYQKGRCPRQNCTFAHGNAELRRFSGSYSRQDYSGSDLRGKLERRHLSPRRLSPARDARSHHNIHDYSPGRSFEKRSDRKRKRDKGIAGQSDVSGGLRFSDRIQDKVREGKLHSSGSKNSLEEQLKKVQSEVNMLDQQKYQLEVYLDESVQEVDSLNSRIQELEAQLYKENEECKRVSSKLRKFIKAHNHNTRLQDELKRSQARLQRLGDQLDSDIARIGVNEEDMSIDIVSNAEDVGFPPITKDNVERNDASPHRKRLPVGHDAVEDTKQVGCLVGTARTRKRSRWNLAAESNDKGDEGPVAADNGTQVTKSLNIEGRPKKGTPSSSGNLGLEKLKDSRAGVPLTSMAAHVADEEVDIELDDNIDKTETAPSEIENEVAFKAGSFPPLPPTLTSSGTNYSQYEGDDENVDVDGLDEEAAITRMDTV 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03252 440 MobiDBLite consensus disorder prediction 327 346 - -
Accr1g03252 440 MobiDBLite consensus disorder prediction 396 423 - -
Accr1g03252 440 Gene3D - 1 36 - -
Accr1g03252 440 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 40 1 428 IPR045868 GO:0046872
Accr1g03252 440 MobiDBLite consensus disorder prediction 301 320 - -
Accr1g03252 440 Coils Coil 131 151 - -
Accr1g03252 440 MobiDBLite consensus disorder prediction 327 347 - -
Accr1g03252 440 ProSiteProfiles Zinc finger C3H1-type profile. 6 32 IPR000571 GO:0046872
Accr1g03252 440 Coils Coil 159 193 - -
Accr1g03252 440 Coils Coil 204 224 - -
Accr1g03252 440 MobiDBLite consensus disorder prediction 49 101 - -
Accr1g03252 440 MobiDBLite consensus disorder prediction 402 418 - -
Accr1g03252 440 MobiDBLite consensus disorder prediction 40 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03252 Accr-Chr1 69170111 69176610 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Accr1g03252 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03252 - - gmx:100811131 489.96