Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03250 ATGGTCGAAAGGAAGCAGTTCAAGACCAGGCTATGCGTGCCGTATCAGAAAGGCCGCTGTCCACGCCAAAATTGCACCTTTGCTCATGGGAATGCTGAGCTGCGGCGATTCTCTGGCTCATATAGTGGTAGGCAAGACTATTCAGGTAGTGACTTGAGAGGAAAACTTGAAAGAAGGCATTTATCACCTCGCAGGTTATCACCGGCAAGAGATGCAAGGAGCCACCATAACATTCATGATTACAGCCCTGGGAGGTCCTTCGAGAAAAGAAGTGATAGGAAGCGCAAGAGAGACAAGGGCATTGCAGGTCAAAGTGATGTTTCTGGAGGCTTGAGATTCTCTGATAGAATCCAAGATAAAGTTAGAGAAGGAAAACTACATTCCTCTGGTTCAAAAAATAGTCTCGAGGAGCAGCTGAAGAAAGTACAGTCGGAAGTCAACATGCTTGACCAGCAAAAGTATCAGCTTGAGGTCTACTTGGATGAGAGTGTTCAAGAAGTGGATAGCCTTAATTCGAGAATTCAGGAACTTGAGGCTCAATTATATAAAGAGAATGAAGAATGTAAAAGGGTCTCATCAAAACTGAGGAAGTTTATCAAAGCGCACAATCATAACACCCGATTACAAGATGAATTAAAGAGATCACAGGCTCGACTTCAAAGGTTGGGAGATCAGCTTGACTCGGACATTGCCAGAATTGGTGTCAATGAAGAAGACATGAGCATTGATATTGTAAGCAATGCTGAGGACGTAGGTTTTCCACCCATCACCAAAGATAATGTGGAGCGGAATGATGCTTCCCCTCACAGGAAAAGGCTGCCTGTTGGCCATGATGCTGTTGAAGATACAAAACAAGTCGGGTGTTTGGTTGGAACAGCCAGAACCAGGAAGCGTTCTCGGTGGAATTTGGCTGCTGAGTCAAACGATAAGGGTGATGAAGGCCCTGTGGCTGCAGATAATGGGACTCAAGTGACCAAGTCCCTTAATATTGAAGGCAGGCCAAAAAAAGGAACGCCTAGTTCTTCTGGCAACCTCGGCTTAGAAAAGTTGAAGGACAGTAGGGCTGGTGTGCCATTAACCAGCATGGCTGCTCATGTGGCTGATGAGGAAGTTGACATTGAGCTTGATGATAACATTGACAAAACTGAAACTGCTCCCTCAGAAATTGAGAACGAAGTGGCATTTAAGGCGGGGAGTTTTCCACCACTTCCGCCAACTCTGACTTCTTCTGGAACGAACTATTCACAGTATGAGGGTGATGATGAGAATGTGGATGTGGATGGGCTTGATGAAGAGGCAGCAATTACACGCATGGATACAGTCTAA 1326 0.4555 MVERKQFKTRLCVPYQKGRCPRQNCTFAHGNAELRRFSGSYSGRQDYSGSDLRGKLERRHLSPRRLSPARDARSHHNIHDYSPGRSFEKRSDRKRKRDKGIAGQSDVSGGLRFSDRIQDKVREGKLHSSGSKNSLEEQLKKVQSEVNMLDQQKYQLEVYLDESVQEVDSLNSRIQELEAQLYKENEECKRVSSKLRKFIKAHNHNTRLQDELKRSQARLQRLGDQLDSDIARIGVNEEDMSIDIVSNAEDVGFPPITKDNVERNDASPHRKRLPVGHDAVEDTKQVGCLVGTARTRKRSRWNLAAESNDKGDEGPVAADNGTQVTKSLNIEGRPKKGTPSSSGNLGLEKLKDSRAGVPLTSMAAHVADEEVDIELDDNIDKTETAPSEIENEVAFKAGSFPPLPPTLTSSGTNYSQYEGDDENVDVDGLDEEAAITRMDTV 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03250 441 MobiDBLite consensus disorder prediction 320 347 - -
Accr1g03250 441 ProSiteProfiles Zinc finger C3H1-type profile. 6 32 IPR000571 GO:0046872
Accr1g03250 441 MobiDBLite consensus disorder prediction 304 348 - -
Accr1g03250 441 MobiDBLite consensus disorder prediction 403 419 - -
Accr1g03250 441 Gene3D - 1 36 - -
Accr1g03250 441 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 40 1 429 IPR045868 GO:0046872
Accr1g03250 441 Coils Coil 132 152 - -
Accr1g03250 441 MobiDBLite consensus disorder prediction 395 424 - -
Accr1g03250 441 MobiDBLite consensus disorder prediction 39 114 - -
Accr1g03250 441 Coils Coil 160 194 - -
Accr1g03250 441 Coils Coil 205 225 - -
Accr1g03250 441 MobiDBLite consensus disorder prediction 50 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03250 Accr-Chr1 69170111 69176610 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Accr1g03250 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03250 - - gmx:100811131 496.893