Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03249 ATGGAGTCCATTTGCCCAATAGACTCGCGGTGTGCCAATGAAATTGCAGCACTTCTCAGTCCTCCGTCACCTCTTCAAGTTCAGGAATATTATCATAAGCTTTTATCTAGAAGGAACTGCAGTAGTATCATAGTCAAACAGGATGGAAACTTTGGAAAGGGTGTGTATGCTGCCGTGGACTTCAATGAAGAGGAGCTTGTTCTGAAAGATCAAATGCTAGTTGGGGTTCAACACTCTTCCAACAAGATTGACTGTTTTGTCTGTAGCTCCTGCTTTTGCTTTATTGGTTCAGTAGAACTTCAAATTGGAAGGAGGCTTTACTTGCAAGAATTAGGGGCTTCTGGGAGTCATGGTTGTGATATGAGTGACTCTTCAAACACATCAAAATACAACCATGACACAGATTCATCTGATGGAGAAGACAATTCATATGAAAAAAAGGAGGATGGCGATGGGGAATGTAGTTTTGGTGGTTCTGAAGCTAAAGTTCATCTCCCTGAAGGTGTTGTTCAATCACTAATGAACGGCCATATGAGGCTGCCTTACTCTAAGGAGTTCTCCATGCCACCAGCTGTTCCTTGCCCTGGTGGATGTGGAGAGTCATTCTACTGCAGCACATCATGTGCAGAGGCTGATTGGGAATCCTGTCATTCTTTGATTTGCACTGGTGAGTGGTCTGATACAGCACGTAGGGAGGCACTTCTAAAATTCATCAAACATGCTAATGAAACAAATGATATATTCCTCCTTGCTGCAAAGGCTATTTCTTCCACCATATTAAGGTACCACAAGTTGAAAGAAAGGTGTCTTTTAGAGAAAGGTAAACATGATAAATCACATCTTTCAAACCATTGCGATCTCACTATTCTTTCAGAGGCTTGGAGACCTATAGCAATGGGACACAAGAGAAGGTGGTGGGACTGCATTGCATTGCCAGATGATATTAGTTCTTCTGATGAAGTTGCATTCAGGATGCAAATAAGAGACTTGGCATTTGAGTCACTCCAACTTCTAACGACAGCTATATTTGACAGAGAGTGTGAACCATTATTCTCCCTGGAAATATATGGGCACATCATTGGCATGTTTGAGCAAAATAATCTTGATTTGGTGGTAGCTTCTCCTGTGGAGGATTACTTTCTATACATCGACGATCTAACATATCCTGAAAAGGAAAAAGCTGAGGAAATTACACGGCCAATTCTGGATGCTCTCGGTGAAGACTATTCCATTTGTTGCCAGGGGACTGCATTTTTTCCATTGCAAAGCTGCATGAACCATTCCTGCTGTCCTAATGCAAAGGCATTCAAAAGAGAGGAGGATAGAGATGGTCAAGCAACGATAATTGCACTGAGGTCCATTCGTAAAGGAGAAGAGATAACCATCTCATATGTCGATGAGGATCATCCATACGAAGAGAGACAAGCCTCCCTTGCAGATTATGGTTTCAAATGCAGGTGTCCAAAGTGCGTTGAAGAACAACCATAG 1488 0.4227 MESICPIDSRCANEIAALLSPPSPLQVQEYYHKLLSRRNCSSIIVKQDGNFGKGVYAAVDFNEEELVLKDQMLVGVQHSSNKIDCFVCSSCFCFIGSVELQIGRRLYLQELGASGSHGCDMSDSSNTSKYNHDTDSSDGEDNSYEKKEDGDGECSFGGSEAKVHLPEGVVQSLMNGHMRLPYSKEFSMPPAVPCPGGCGESFYCSTSCAEADWESCHSLICTGEWSDTARREALLKFIKHANETNDIFLLAAKAISSTILRYHKLKERCLLEKGKHDKSHLSNHCDLTILSEAWRPIAMGHKRRWWDCIALPDDISSSDEVAFRMQIRDLAFESLQLLTTAIFDRECEPLFSLEIYGHIIGMFEQNNLDLVVASPVEDYFLYIDDLTYPEKEKAEEITRPILDALGEDYSICCQGTAFFPLQSCMNHSCCPNAKAFKREEDRDGQATIIALRSIRKGEEITISYVDEDHPYEERQASLADYGFKCRCPKCVEEQP 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03249 495 SMART set_7 41 471 IPR001214 GO:0005515
Accr1g03249 495 MobiDBLite consensus disorder prediction 118 132 - -
Accr1g03249 495 MobiDBLite consensus disorder prediction 133 155 - -
Accr1g03249 495 Pfam SET domain 394 464 IPR001214 GO:0005515
Accr1g03249 495 Gene3D SET domain 387 494 IPR046341 -
Accr1g03249 495 ProSiteProfiles SET domain profile. 41 465 IPR001214 GO:0005515
Accr1g03249 495 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR2 13 494 IPR044237 GO:0008168
Accr1g03249 495 SUPERFAMILY SET domain 42 488 IPR046341 -
Accr1g03249 495 CDD SET_SMYD 404 490 - -
Accr1g03249 495 MobiDBLite consensus disorder prediction 116 155 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Accr1g03249 SET 1.4e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03249 - - pcin:129300428 930.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g03249 1 69152340 69169030 Accr1g03249 1 69152340 69169030 ECH