Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03236 ATGGATCATAACTTTATCTCACCCTATTCTGCCGCCGATGACACCTCCTCCTTGGAGCCTATGTTTTCCGGCGTCACCCTTCAGTCCATCCTCAGCCTCCATCCCTCCGTCTTCTCTGACTACGCCGCCGCCAATGACCTCCCCAGCTTCGCCTTCCTATCGGATCCTTCACTGTCTCTGAATCTTCCGGCTGAATCTCCCCAGGGCTTTCCCACTGATGAGGACCTCAAGGCAGACACGAGTGAGAAGAACCCGACGATCATGCCCAAATCTGAGCCAGGTCTCTTCGAATACCCTGCCACCTCTGGGACCACTTCACATTCCTTCGACTTCTTCTCCGGCCTTTGCCCTCCCAGCTTCTACGACCCATCAATCTTCAACCCTCTCCCTCAGCTCCATTCCGTCGAGTCCTATCCTCATAAGCGTCCCCGCTTCGACTCACTCATTTCCACTCCCAACACCATACCGGCGCCGCCGCAACACAGCCCTGACCTTGCCACCTTCGGCAATAGCCTCTTGGCCACCACGCCTCCGCACAACACCAAACCGGCCTCTTCTTCGCTGGATGCTCCCGCTGGTGAAAAATCCTCTCCGGTGATCCCTCAGAGCAGCCTGGCACGTCAGCGGCGGCAGAAGCTGAGCGACAAGACTCGGTGCTTGCAGAAATTGATGCCGTGGGACAAGAAGATGGACCAAGCTACGCTGCTGGAGGAGGCGTACAAGTATGTGAAATTTCTGCAGGCCCAGTTCAATGCCCTCCAATCCATGCCCTCCCATTCGCCTTTCCTGTCTCACTGTGGTTCTTCGCATTCCCAATCCTCCGTTCAAAACGGCGGCGTGTTTGGGGATTTGGAGAGGTTGAACCGCAACCAGGTGTTGCAGGTGCTGGTGAACTCGCCTGTCGCTCAAACAAGGCTTTGCTCTCAAGGCTTCTGTGTGTTCTCCGTGGAACAGTTAACTTTGCTGAGCAACACGACAGGGAAGAGACTTATCCTGCCGCCGATGATGTCTGATAACGCTTCTTCAAAATCCTTTCAGTGA 1041 0.5524 MDHNFISPYSAADDTSSLEPMFSGVTLQSILSLHPSVFSDYAAANDLPSFAFLSDPSLSLNLPAESPQGFPTDEDLKADTSEKNPTIMPKSEPGLFEYPATSGTTSHSFDFFSGLCPPSFYDPSIFNPLPQLHSVESYPHKRPRFDSLISTPNTIPAPPQHSPDLATFGNSLLATTPPHNTKPASSSLDAPAGEKSSPVIPQSSLARQRRQKLSDKTRCLQKLMPWDKKMDQATLLEEAYKYVKFLQAQFNALQSMPSHSPFLSHCGSSHSQSSVQNGGVFGDLERLNRNQVLQVLVNSPVAQTRLCSQGFCVFSVEQLTLLSNTTGKRLILPPMMSDNASSKSFQ 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03236 346 MobiDBLite consensus disorder prediction 146 214 - -
Accr1g03236 346 MobiDBLite consensus disorder prediction 63 95 - -
Accr1g03236 346 Gene3D - 201 260 IPR036638 GO:0046983
Accr1g03236 346 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 198 257 IPR036638 GO:0046983
Accr1g03236 346 Pfam Helix-loop-helix DNA-binding domain 207 247 IPR011598 GO:0046983
Accr1g03236 346 MobiDBLite consensus disorder prediction 164 208 - -
Accr1g03236 346 SMART finulus 203 252 IPR011598 GO:0046983
Accr1g03236 346 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 197 246 IPR011598 GO:0046983
Accr1g03236 346 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 176 323 IPR045843 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03236 Accr-Chr1 69068011 69069051 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03236 209 319 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G22100 45.614 8.33e-26 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Accr1g03236 HLH 0.00026 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03236 - - pcin:129314920 485.337