Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03229 ATGCAGAAATTAGAGAAAGCCCTTACTAAAGGGGATGGATCTAAGTCCCTGGCAGAGAAGCTGGCGAGATGGAAAGAATATAATGCCCAGCTTGATTCCTGCAATGATGCAGATAAGCCAATTCGCAAAGTTCCTGCCAAAGGATCAAAGAAGGGATGCATGAAAGGTAAAGGAGGGCCTGAGAACTCTCGTTGTAACTACAGGGGCGTGAGGCAGAGGACATGGGGCAAGTGGGTTGCTGAAATTCGAGAGCCAAACAGAGGAAGTAGGCTCTGGTTGGGTACATTCCCCACCGCCATTGCAGCTGCTCTTGCCTATGATGAAGCAGCAAGGGCATTGTATGGTTCTTTAGCTCGCCTCAACTTTCCCAATGTTTCAGTCTCCAATCGTTCTAATGAATCTTCAAGAGATTCACTAGTTGCAAGTCAATCTGATTCTGCAGTGCCAACTGAGTCTGGGATCTCCCCAACCAAGTCTGGCTTTGGTGAGTTGGATAATACCGACAAGAAACCTGTTCCCTTGAATGTAAAAGTTGAGGAGGTGGAAGTTGAATTGAGGATCAATTCCTCTACGCTTTCATGA 582 0.4674 MQKLEKALTKGDGSKSLAEKLARWKEYNAQLDSCNDADKPIRKVPAKGSKKGCMKGKGGPENSRCNYRGVRQRTWGKWVAEIREPNRGSRLWLGTFPTAIAAALAYDEAARALYGSLARLNFPNVSVSNRSNESSRDSLVASQSDSAVPTESGISPTKSGFGELDNTDKKPVPLNVKVEEVEVELRINSSTLS 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03229 193 PRINTS Ethylene responsive element binding protein signature 67 78 IPR001471 GO:0003700|GO:0006355
Accr1g03229 193 PRINTS Ethylene responsive element binding protein signature 89 105 IPR001471 GO:0003700|GO:0006355
Accr1g03229 193 MobiDBLite consensus disorder prediction 38 61 - -
Accr1g03229 193 Gene3D AP2/ERF domain 66 125 IPR036955 GO:0003700|GO:0006355
Accr1g03229 193 MobiDBLite consensus disorder prediction 126 162 - -
Accr1g03229 193 CDD AP2 65 125 IPR001471 GO:0003700|GO:0006355
Accr1g03229 193 ProSiteProfiles AP2/ERF domain profile. 66 123 IPR001471 GO:0003700|GO:0006355
Accr1g03229 193 FunFam Ethylene-responsive transcription factor 2 65 124 - -
Accr1g03229 193 Pfam AP2 domain 65 115 IPR001471 GO:0003700|GO:0006355
Accr1g03229 193 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 3 157 - -
Accr1g03229 193 MobiDBLite consensus disorder prediction 126 175 - -
Accr1g03229 193 SMART rav1_2 66 129 IPR001471 GO:0003700|GO:0006355
Accr1g03229 193 SUPERFAMILY DNA-binding domain 66 123 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03229 Accr-Chr1 69000737 69001318 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03229 10 164 AP2-EREBP Transcription Factor Family AT2G40340 54.878 5.83e-52 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr1g03229 AP2 2.4e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03229 - - gmx:100527471 237.654