Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03224 ATGAAGAATTGTGAGCTGTGCAAGACTCCGGCAAGGACCTACTGCGAGTCCGACCAGGCTAGCTTGTGTTGGGAATGCGACGCTAAGGTCCATGGAGCCAACTTCTTGGTAACCAGGCACTCCAGGACTCTTCTCTGTCATGCGTGTCAGTCTCTAACTCCATGGAAAGCCTCTGGTGCCAAGCTTGGAAACACCCTTTCTCTCTGCGAGACTTGTAGCGGCGGAATGAAGGATGCTGGCGAAGGTGACGAGAGCGGAGATGAAAATGACGACGACGTAGACACAGAGGACGACCTTGACGATGAAGACGACGGTGGTGATGGAGATGAGGATGGAGATAATCAGGTAGTTCCCTTGTCCTCCACACCGCCTCCGCCGGCGTCAAACTCATCCAGCAGTGAAGAGTCAATTAGCAGATGGAATAGCAGCAATAGAGTTGTTTCTGAAACGGCGAGCACAATATCGTTGAAACGAAAGCGTGAGGATGCATCGGATCTTAATTTCCAGGATCGGTGGAAGTGGTGGCGTGATAAAGATGGGAAAGGAGGGGAGCTGAAAAAGCAGGTGGCGTGGTTAGAATGTGAAGGGGGCGAAGGAACGTCGGAGGAATTTCCGAGAGGCAGAGAGATCGGACCGGCGACCTCGAAGGGATCCAATGATGCCAAAACGCCGGAAGCCGTTTGA 684 0.5278 MKNCELCKTPARTYCESDQASLCWECDAKVHGANFLVTRHSRTLLCHACQSLTPWKASGAKLGNTLSLCETCSGGMKDAGEGDESGDENDDDVDTEDDLDDEDDGGDGDEDGDNQVVPLSSTPPPPASNSSSSEESISRWNSSNRVVSETASTISLKRKREDASDLNFQDRWKWWRDKDGKGGELKKQVAWLECEGGEGTSEEFPRGREIGPATSKGSNDAKTPEAV 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03224 227 ProSiteProfiles Zinc finger B-box type profile. 1 45 IPR000315 GO:0008270
Accr1g03224 227 CDD Bbox1_BBX-like 4 45 - -
Accr1g03224 227 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 3 163 - -
Accr1g03224 227 MobiDBLite consensus disorder prediction 196 227 - -
Accr1g03224 227 MobiDBLite consensus disorder prediction 126 153 - -
Accr1g03224 227 SMART bboxneu5 1 45 IPR000315 GO:0008270
Accr1g03224 227 Pfam B-box zinc finger 2 42 IPR000315 GO:0008270
Accr1g03224 227 MobiDBLite consensus disorder prediction 83 111 - -
Accr1g03224 227 MobiDBLite consensus disorder prediction 79 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03224 Accr-Chr1 68972136 68972941 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03224 2 105 C2C2-CO-like Transcription Factor Family AT4G27310 55.856 8.19e-37 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Accr1g03224 zf-B_box 1.4e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03224 - - qsa:O6P43_000639 187.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g03224 1 68972136 68972941 Accr13g00626 13 6801476 6802184 CCT
Accr1g03224 1 68972136 68972941 Accr1g03224 1 68972136 68972941 ECH