Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03214 ATGGTGAGAAGTCCCTTTTACGACAAAAATGGGGTGAAGAAAGGTGCGTGGAGTAGAGAAGAGGATGAAAAACTGAGGGCCTTTGTTCTGAGACATGGTCATACCAATTGGCGTCAACTCCCCAAGCTTGCAGGTTTAGCGAGGTGCGGAAAAAGCTGCAGACTTCGTTGGATGAACTACCTGCGACCAAATCTTAAACACGGCAACTACACTCAAGAGGAGGAGGAACTCATCATCAAATACCACCAACTACTTGGGAATAAATGGTCATTGATTGCTGAGAAACTACCAGGACGAACCGACAATGATATAAAGAACCACTGGCACAGCCACCTCAAGAAGAACTTAAACCACAGTGACACTGGGAAGGAGGGGAAATACTTGAAGACGGCAGATTATACAGAATCTGAACGGACAAGTGAGTCTGTGGGTTCTGAATCTGAGAGTCATCACCATATACTGGAAAGCTCATGGGTATGGCCGGCTTCTTCAGAAACACGCGATAGCTGCACCCAAGAAAAGCACTCGGACTCGAGCGTTGCACTTGCACAATCAACCATCACGTCTTGCGGGGAAGATCAGGACGCTAGTGTTGCTTCCTGCTGGGAAGCATCGCAAGAATTCATAACTAGCGATTTTTGGAGCGGACCATTTTTGGTGGAAAATACATCTACTTGTGACATTTCCCCCCAAATGTTTTGGTACCCTTACGTCGGTACTGATTTGAGTGACCTACACGGTTTGCTAGACTGGTAA 756 0.4669 MVRSPFYDKNGVKKGAWSREEDEKLRAFVLRHGHTNWRQLPKLAGLARCGKSCRLRWMNYLRPNLKHGNYTQEEEELIIKYHQLLGNKWSLIAEKLPGRTDNDIKNHWHSHLKKNLNHSDTGKEGKYLKTADYTESERTSESVGSESESHHHILESSWVWPASSETRDSCTQEKHSDSSVALAQSTITSCGEDQDASVASCWEASQEFITSDFWSGPFLVENTSTCDISPQMFWYPYVGTDLSDLHGLLDW 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03214 251 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Accr1g03214 251 CDD SANT 69 112 IPR001005 -
Accr1g03214 251 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Accr1g03214 251 CDD SANT 16 61 IPR001005 -
Accr1g03214 251 SMART sant 66 114 IPR001005 -
Accr1g03214 251 SMART sant 13 63 IPR001005 -
Accr1g03214 251 Gene3D - 68 142 - -
Accr1g03214 251 Gene3D - 7 67 - -
Accr1g03214 251 FunFam Transcription factor RAX3 7 67 - -
Accr1g03214 251 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 186 - -
Accr1g03214 251 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Accr1g03214 251 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Accr1g03214 251 MobiDBLite consensus disorder prediction 131 150 - -
Accr1g03214 251 Pfam Myb-like DNA-binding domain 68 112 IPR001005 -
Accr1g03214 251 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Accr1g03214 251 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03214 Accr-Chr1 68881824 68882869 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03214 1 119 MYB Transcription Factor Family AT1G06180 67.227 3.19e-54 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr1g03214 Myb_DNA-binding 1.4e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03214 K09422 - gmx:100781032 223.402