Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03207 ATGGGAAGAGCACCTTGCTGTGACAAAAACGGACTCAAGAAGGGTCCATGGACCCCCGAGGAAGATCTAAAGCTCATCAACTACGTTCAGATTCATGGACCCGGAAATTGGCGGACTCTCCCCAAGAATGCTGGTCTGGAAAGATGTGGCAAGAGTTGCCGCCTTCGATGGACAAATTACCTGAGGCCCGATATCAAGAGAGGGAGATTCTCCTTTGAGGAAGAAGAGACCATCATTCAGTTGCACAGCATCCTGGGAAACAAATGGTCGGCTATAGCAGCAAGATTACCAGGAAGAACCGACAATGAAATAAAGAACTATTGGAACACCCACATTAGGAAGAGACTGCTTCGAACGGGAATTGACCCGGTTACTCATGCCCCACGCCTCGACCTTCTAGAGATATCTTCCACTCTAAGGTCAGTGCTGACGAACAACCAATCGCTTCTGAATCTGCAAAGTTTATTGAGGGCTCAAGCTTTGATGAACCCTCAACTGTTGAAGCTGGCCACCAATCTGCTAGCGCTTAAGAGCCAGAACCCTGATTTGGTTTCACAGAATCTACAACAAATCCTTCAGGCCGCCGGGAATCATCAAGTAGACAGCCAAGCCTGCCCTTTCAGTCAGATGCCAACTCAGAATACCAATATGCATGAAGGTCTCTCAGGCAATATCAGAAACATAAGCTGTTCATCAAGTTCGCAGCAGAGTTCATCACTTGCTTCATATTTATGTGAGGATCTCATTAATCCGCAACAAAACCAAGTTGATTTGCAAGGAATAAACCCTTCATTCGGGCATTGTCTAATGAGCAATGAAAATGTGCAGAGCATTGGGTATGAGTCAGTTCTGTCTACGCCTTTGTCAAGTCCGAAGCCGTTGAATTCGTCGTCCACGTATTTGAGTAGCAGCGCGGAGGAGCAAAGGGATACCCATTGCAGCGACATCTTCAAGTTCGAAATTCCCGAAAGTCTCGACATCAGTGACTTCTTGTAA 996 0.4669 MGRAPCCDKNGLKKGPWTPEEDLKLINYVQIHGPGNWRTLPKNAGLERCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLLRTGIDPVTHAPRLDLLEISSTLRSVLTNNQSLLNLQSLLRAQALMNPQLLKLATNLLALKSQNPDLVSQNLQQILQAAGNHQVDSQACPFSQMPTQNTNMHEGLSGNIRNISCSSSSQQSSSLASYLCEDLINPQQNQVDLQGINPSFGHCLMSNENVQSIGYESVLSTPLSSPKPLNSSSTYLSSSAEEQRDTHCSDIFKFEIPESLDISDFL 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03207 331 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Accr1g03207 331 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Accr1g03207 331 SMART sant 66 114 IPR001005 -
Accr1g03207 331 SMART sant 13 63 IPR001005 -
Accr1g03207 331 FunFam MYB-related transcription factor 13 66 - -
Accr1g03207 331 CDD SANT 69 112 IPR001005 -
Accr1g03207 331 CDD SANT 16 61 IPR001005 -
Accr1g03207 331 Gene3D - 69 116 - -
Accr1g03207 331 Gene3D - 13 66 - -
Accr1g03207 331 FunFam Transcription factor MYB39 69 130 - -
Accr1g03207 331 MobiDBLite consensus disorder prediction 287 307 - -
Accr1g03207 331 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Accr1g03207 331 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Accr1g03207 331 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Accr1g03207 331 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Accr1g03207 331 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 267 - -
Accr1g03207 331 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03207 Accr-Chr1 68850484 68851683 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03207 1 331 MYB Transcription Factor Family AT4G21440 49.454 9.92e-104 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr1g03207 Myb_DNA-binding 9.3e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03207 K09422 - qsa:O6P43_000650 392.504