Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03182 ATGGCCACCGCGAATAACAGTGGTAAATTCTCCGATGGTGGTGGAGAAATCCGAGATTGGGAGATTGAAAGGGGTAAAGATGTCGACTTGAGCGGCGAGAGGCGGCCACGCAAGCCAGTTTTTGAGGATGCTTCCGTGTCAAACAGGCCTCTCAAGAAAATCCGAAGCCCCCAACGTCAAAACTCCAACCAAAATCAATCCTCTGTTCCCATTCTGCCACATCCTCCCTCCTCCCTTCCTTCTTCGTCTTCCAGGATCGTCTTCCCTTTTGCATTCGACGGCTCTCAACAGCCTCTGCAATTTCCCCACCAACAATATGGCTCCGCCAATTTGCCGGCGTTTCGCCCACCGTTTCAGGGGACACAAAATCAGCAGCAATTGTTGTCTTTTGGGTCCCAACAGCCAAACATGGTGTACCCACAATTCTTAGGCCAAGACCCTGGAATCGCACCCCAGCAGCAACAGCATCAACTTCTTCAGTATTGGAGAGACGCATTGAATCTGAGCCCGAGAGGAAGGATGATGATGATGATGAACAACGTAGGGCCGGACGGGAGGCCAATGTACAGGCCCCCTCCTCAGCCTATAAACACTACGAAGCTCTACAGAGGAGTGAGGCAACGGCATTGGGGAAAATGGGTGGCTGAGATTCGTCTTCCTCGAAACAGGACTCGCCTCTGGCTGGGAACATTCGACACAGCTGAAGATGCTGCCCTGGCTTATGATCGCGAGGCCTTTAAGCTGAGAGGAGAGAATGCCAGGCTCAATTTCCCAGAGCTCTTCCTCAATAAGGATAAGCCTTCATCATCAACAGCCCCAGGTTCATCTCCTTCTTCTCCCTCCACTCCTCAACAAGGTTCAACGTCGAAGCAAACTGACTCTGTTCCAGAGGGTTTCATTGCGGAGGAGAAGCCTCCGCAACCGCCACCACCGGAAGAGAGCACCGACAATGATTCTGGAATTGGGTCAAGTGACCTTACAATGAGCGACGAAGTACAGGCTGCATCTAATACTGGAACAGGGGAGGGCAGTTCGGCGGCGTCGCAGGAACTGGTTTGGGGAGAAATGGCGGCTTGGTTCAATGCAATTCCGGCGGGTTGGGGTCCGGGTAGCCCTGTGTGGGACGATTTGGACACGTTTCAGTCGCAGCTTCCTTTTTCGAATCCCAATCACCATGAATTTAATGTTATAGATACTCACAGACAGCAAGAAGAAAACACAGGACCATCAGATCCTTATACTTCCTCCTCTTCTTGTCCCGTGAGACCCTTCTTCTGGAAAGGTCAAGACTGA 1293 0.5174 MATANNSGKFSDGGGEIRDWEIERGKDVDLSGERRPRKPVFEDASVSNRPLKKIRSPQRQNSNQNQSSVPILPHPPSSLPSSSSRIVFPFAFDGSQQPLQFPHQQYGSANLPAFRPPFQGTQNQQQLLSFGSQQPNMVYPQFLGQDPGIAPQQQQHQLLQYWRDALNLSPRGRMMMMMNNVGPDGRPMYRPPPQPINTTKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEDAALAYDREAFKLRGENARLNFPELFLNKDKPSSSTAPGSSPSSPSTPQQGSTSKQTDSVPEGFIAEEKPPQPPPPEESTDNDSGIGSSDLTMSDEVQAASNTGTGEGSSAASQELVWGEMAAWFNAIPAGWGPGSPVWDDLDTFQSQLPFSNPNHHEFNVIDTHRQQEENTGPSDPYTSSSSCPVRPFFWKGQD 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03182 430 SMART rav1_2 201 264 IPR001471 GO:0003700|GO:0006355
Accr1g03182 430 SUPERFAMILY DNA-binding domain 201 259 IPR016177 GO:0003677
Accr1g03182 430 ProSiteProfiles AP2/ERF domain profile. 201 258 IPR001471 GO:0003700|GO:0006355
Accr1g03182 430 MobiDBLite consensus disorder prediction 263 295 - -
Accr1g03182 430 MobiDBLite consensus disorder prediction 14 42 - -
Accr1g03182 430 MobiDBLite consensus disorder prediction 51 82 - -
Accr1g03182 430 MobiDBLite consensus disorder prediction 262 326 - -
Accr1g03182 430 CDD AP2 200 260 IPR001471 GO:0003700|GO:0006355
Accr1g03182 430 MobiDBLite consensus disorder prediction 401 422 - -
Accr1g03182 430 Pfam AP2 domain 202 250 IPR001471 GO:0003700|GO:0006355
Accr1g03182 430 MobiDBLite consensus disorder prediction 1 82 - -
Accr1g03182 430 Gene3D AP2/ERF domain 201 259 IPR036955 GO:0003700|GO:0006355
Accr1g03182 430 FunFam Ethylene-responsive transcription factor 2 200 259 - -
Accr1g03182 430 PRINTS Ethylene responsive element binding protein signature 202 213 IPR001471 GO:0003700|GO:0006355
Accr1g03182 430 PRINTS Ethylene responsive element binding protein signature 224 240 IPR001471 GO:0003700|GO:0006355
Accr1g03182 430 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 33 377 - -
Accr1g03182 430 MobiDBLite consensus disorder prediction 397 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03182 Accr-Chr1 68559422 68560714 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03182 108 388 AP2-EREBP Transcription Factor Family AT2G20880 47.038 9.13e-62 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr1g03182 AP2 3.1e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03182 - - qsa:O6P43_028790 488.419